Datensatz:

Tara Pacific 16S rRNA data analysis release

Vorschaubild

Datum der Erstveröffentlichung

2022

Autor:innen

Ruscheweyh, Hans-Joachim
Salazar, Guillem
Poulain, Julie
Belser, Caroline
Clayssen, Quentin
Boissin, Emilie
Galand, Pierre E.
Pesant, Stéphane
Lombard, Fabien
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Repositorium der Erstveröffentlichung

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DOI (Link zu den Daten)
https://doi.org/10.5281/zenodo.4073268
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oops

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Biologie: Datensätze
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Publikationsstatus
Published

Zusammenfassung

This data is the result of the primary analysis of the 16S rRNA gene sequencing data collected from all islands as part of the Tara Pacific expedition. The analysis was conducted using cutadapt/snakemake/dada2 and usearch. A full README is contained within the data upload.   Taxonomic abundance tables (ASVs, OTUs) released together with the TARA Pacific publications can be found in Version 1.1.0 of this repository.

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Fachgebiet (DDC)
570 Biowissenschaften, Biologie

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UniCor and UniCorP : A Novel Metric and Hierarchical Feature Selection Algorithm for Microbial Community Analysis
(2025) Staab, Sebastian; Mayer, Kim-Isabelle; Cárdenas, Anny; Peixoto, Raquel; Schreiber, Falk; Voolstra, Christian R.
Erschienen in: ISME Communications. Oxford University Press (OUP). 2025, 5(1), ycaf174. eISSN 2730-6151. Verfügbar unter: doi: 10.1093/ismeco/ycaf174
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ISO 690RUSCHEWEYH, Hans-Joachim, Guillem SALAZAR, Julie POULAIN, Caroline BELSER, Quentin CLAYSSEN, Benjamin C. C. HUME, Emilie BOISSIN, Pierre E. GALAND, Stéphane PESANT, Fabien LOMBARD, Eric ARMSTRONG, Naama LANG YONA, Grace KLINGES, Ryan MCMINDS, Nicolas HENRY, Rebecca VEGA THURBER, Clémentine MOULIN, Sylvain AGOSTINI, Bernard BANAIGS, Emmanuel BOSS, Chris BOWLER, Colomban DE VARGAS, Eric DOUVILLE, J. Michel FLORES, Didier FORCIOLI, Paola FURLA, Eric GILSON, Stéphanie REYNAUD, Matthew B. SULLIVAN, Olivier THOMAS, Romain TROUBLÉ, Didier ZOCCOLA, Serge PLANES, Denis ALLEMAND, Christian R. VOOLSTRA, Patrick WINCKER, Shinichi SUNAGAWA, 2022. Tara Pacific 16S rRNA data analysis release
BibTex
RDF
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