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  (3 MiB)
  Genomes of coral dinoflagellate symbionts highlight evolutionary adaptations conducive to a symbiotic lifestyle 

  Aranda, Manuel; Li, Yong; Liew, Yi Jin; Baumgarten, Sebastian; Simakov, Oleg; Wilson, Michael C.; Piel, Jörn; Ashoor, Haitham; Bougouffa, Salim; Voolstra, Christian R. et al. (2016) - Journal article
  Published in: Scientific Reports ; 6 (2016). - 39734. - Springer Nature. - eISSN 2045-2322
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  (702.9 KiB)
  Assessing the effects of iron enrichment across holobiont compartments reveals reduced microbial nitrogen fixation in the Red Sea coral Pocillopora verrucosa 

  Rädecker, Nils; Pogoreutz, Claudia; Ziegler, Maren; Ashok, Ananya; Barreto, Marcelle M.; Chaidez, Veronica; Grupstra, Carsten G. B.; Ng, Yi Mei; Perna, Gabriela; Aranda, Manuel; Voolstra, Christian R. (2017) - Journal article
  Published in: Ecology and Evolution ; 7 (2017), 16. - pp. 6614-6621. - Wiley. - eISSN 2045-7758
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  (1.7 MiB)
  An improved primer set and amplification protocol with increased specificity and sensitivity targeting the Symbiodinium ITS2 region 

  Hume, Benjamin C. C.; Ziegler, Maren; Poulain, Julie; Pochon, Xavier; Romac, Sarah; Boissin, Emilie; de Vargas, Colomban; Planes, Serge; Wincker, Patrick; Voolstra, Christian R. (2018) - Journal article
  Published in: PeerJ ; 6 (2018). - e4816. - PeerJ. - eISSN 2167-8359
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  (4.8 MiB)
  MultiSegVA : Using Visual Analytics to Segment Biologging Time Series on Multiple Scales 

  Meschenmoser, Philipp; Buchmüller, Juri F.; Seebacher, Daniel; Wikelski, Martin; Keim, Daniel A. (2020) - Contribution to a conference
  Published in: Proceedings of IEEE Conference on Visual Analytics Science and Technology (VAST), 2020. - Piscataway, NJ : IEEE, 2020
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  (4.3 MiB)
  Aiptasia sp. larvae as a model to reveal mechanisms of symbiont selection in cnidarians 

  Wolfowicz, Iliona; Baumgarten, Sebastian; Voss, Philipp A.; Hambleton, Elizabeth A.; Voolstra, Christian R.; Hatta, Masayuki; Guse, Annika (2016) - Journal article
  Published in: Scientific Reports ; 6 (2016). - 32366. - Springer Nature. - eISSN 2045-2322
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  (2.3 MiB)
  In situ observations of coral bleaching in the central Saudi Arabian Red Sea during the 2015/2016 global coral bleaching event 

  Monroe, Alison A.; Ziegler, Maren; Roik, Anna; Röthig, Till; Hardenstine, Royale S.; Emms, Madeleine A.; Jensen, Thor; Voolstra, Christian R.; Berumen, Michael L. (2018) - Journal article
  Published in: PLoS one ; 13 (2018), 4. - e0195814. - Public Library of Science (PLoS). - eISSN 1932-6203
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  (1.3 MiB)
  DNA methylation regulates transcriptional homeostasis of algal endosymbiosis in the coral model Aiptasia 

  Li, Yong; Liew, Yi Jin; Cui, Guoxin; Cziesielski, Maha J.; Zahran, Noura; Michell, Craig T.; Voolstra, Christian R.; Aranda, Manuel (2018) - Journal article
  Published in: Science Advances ; 4 (2018), 8. - eaat2142. - American Association for the Advancement of Science (AAAS). - eISSN 2375-2548
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  (2.4 MiB)
  Comparative analysis of the genomes of Stylophora pistillata and Acropora digitifera provides evidence for extensive differences between species of corals 

  Voolstra, Christian R.; Li, Yong; Liew, Yi Jin; Baumgarten, Sebastian; Zoccola, Didier; Flot, Jean-François; Tambutté, Sylvie; Allemand, Denis; Aranda, Manuel (2017) - Journal article
  Published in: Scientific Reports ; 7 (2017). - 17583. - Springer Nature. - eISSN 2045-2322
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  (2.5 MiB)
  Desulfatiglans anilini Initiates Degradation of Aniline With the Production of Phenylphosphoamidate and 4-Aminobenzoate as Intermediates Through Synthases and Carboxylases From Different Gene Clusters 

  Xie, Xiaoman; Spiteller, Dieter; Huhn, Thomas; Schink, Bernhard; Müller, Nicolai (2020) - Journal article
  Published in: Frontiers in Microbiology ; 11 (2020). - 2064. - Frontiers Media. - eISSN 1664-302X
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  (4.8 MiB)
  Environmental and Intestinal Phylum Firmicutes Bacteria Metabolize the Plant Sugar Sulfoquinovose via a 6-Deoxy-6-sulfofructose Transaldolase Pathway 

  Frommeyer, Benjamin; Fiedler, Alexander W.; Oehler, Sebastian R.; Hanson, Buck T.; Loy, Alexander; Franchini, Paolo; Spiteller, Dieter; Schleheck, David (2020) - Journal article
  Published in: iScience ; 23 (2020), 9. - 101510. - Elsevier. - eISSN 2589-0042
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  (930.3 KiB)
  Embryonic stem cell-specific microRNAs contribute to pluripotency by inhibiting regulators of multiple differentiation pathways 

  Gruber, Andreas J.; Grandy, William A.; Balwierz, Piotr J.; Dimitrova, Yoana A.; Pachkov, Mikhail; Ciaudo, Constance; Nimwegen, Erik van; Zavolan, Mihaela (2014) - Journal article
  Published in: Nucleic acids research ; 42 (2014), 14. - pp. 9313-9326. - PubMed Central. - ISSN 0301-5610. - eISSN 1362-4962
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  (1.5 MiB)
  ISMARA : automated modeling of genomic signals as a democracy of regulatory motifs 

  Balwierz, Piotr J.; Pachkov, Mikhail; Arnold, Phil; Gruber, Andreas J.; Zavolan, Mihaela; van Nimwegen, Erik (2014) - Journal article
  Published in: Genome research ; 24 (2014), 5. - pp. 869-884. - Cold Spring Harbor Laboratory Press. - ISSN 1054-9803. - eISSN 1549-5469
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  (894.1 KiB)
  Identification of a 3-Alkylpyridinium Compound from the Red Sea Sponge Amphimedon chloros with In Vitro Inhibitory Activity against the West Nile Virus NS3 Protease 

  O'Rourke, Aubrie; Kremb, Stephan; Duggan, Brendan M.; Sioud, Salim; Kharbatia, Najeh; Raji, Misjudeen; Emwas, Abdul-Hamid; Gerwick, William H.; Voolstra, Christian R. (2018) - Journal article
  Published in: Molecules : A Journal of Synthetic Chemistry and Natural Product Chemistry ; 23 (2018), 6. - 1472. - Molecular Diversity Preservation International (MDPI). - eISSN 1420-3049
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  (473.3 KiB)
  Ecological and molecular characterization of a coral black band disease outbreak in the Red Sea during a bleaching event 

  Hadaidi, Ghaida; Ziegler, Maren; Shore-Maggio, Amanda; Jensen, Thor; Aeby, Greta; Voolstra, Christian R. (2018) - Journal article
  Published in: PeerJ ; 6 (2018). - e5169. - PeerJ. - eISSN 2167-8359
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  (1.3 MiB)
  Global 3′ UTR shortening has a limited effect on protein abundance in proliferating T cells 

  Gruber, Andreas R.; Martin, Georges; Müller, Philipp; Schmidt, Alexander; Gruber, Andreas J.; Gumienny, Rafal; Mittal, Nitish; Jayachandran, Rajesh; Pieters, Jean; Zavolan, Mihaela et al. (2014) - Journal article
  Published in: Nature Communications ; 5 (2014), 1. - 5465. - Nature Publishing Group. - eISSN 2041-1723
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  (4.5 MiB)
  Discovery of physiological and cancer-related regulators of 3' UTR processing with KAPAC 

  Gruber, Andreas J.; Schmidt, Ralf; Ghosh, Souvik; Martin, Georges; Gruber, Andreas R.; van Nimwegen, Erik; Zavolan, Mihaela (2018) - Journal article
  Published in: Genome biology ; 19 (2018), 1. - 44. - BioMed Central. - ISSN 1465-6906. - eISSN 1465-6914
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  (2.7 MiB)
  The conserved WW-domain binding sites in Dystroglycan C-terminus are essential but partially redundant for Dystroglycan function 

  Yatsenko, Andriy S.; Kucherenko, Mariya M.; Pantoja, Mario; Fischer, Kevin A.; Madeoy, Jennifer; Deng, Wu-Min; Schneider, M.; Baumgartner, Stefan; Shcherbata, Halyna; Ruohola-Baker, Hannele et al. (2009) - Journal article
  Published in: BMC Developmental Biology ; 9 (2009), 1. - 18. - BioMed Central. - eISSN 1471-213X
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  (662.2 KiB)
  Symbiodinium genomes reveal adaptive evolution of functions related to coral-dinoflagellate symbiosis 

  Liu, Huanle; Stephens, Timothy G.; González-Pech, Raúl A.; Beltran, Victor H.; Lapeyre, Bruno; Bongaerts, Pim; Cooke, Ira; Aranda, Manuel; Voolstra, Christian R.; Chan, Cheong Xin et al. (2018) - Journal article
  Published in: Communications biology ; 2018, 1. - 95. - Springer Nature. - eISSN 2399-3642
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  (3.1 MiB)
  Range-dependent flexibility in the acoustic field of view of echolocating porpoises (Phocoena phocoena) 

  Wisniewska, Danuta M.; Ratcliffe, John M.; Beedholm, Kristian; Christensen, Christian B.; Johnson, Mark; Koblitz, Jens C.; Wahlberg, Magnus; Madsen, Peter T. (2015) - Journal article
  Published in: eLife ; 4 (2015). - e05651. - eLife Sciences Publications. - eISSN 2050-084X
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  (1.1 MiB)
  Defining management units for cetaceans by combining genetics, morphology, acoustics and satellite tracking 

  Sveegaard, Signe; Galatius, Anders; Dietz, Rune; Kyhn, Line; Koblitz, Jens C.; Amundin, Mats; Nabe-Nielsen, Jacob; Sinding, Mikkel-Holger S.; Andersen, Liselotte W.; Teilmann, Jonas (2015) - Journal article
  Published in: Global Ecology and Conservation ; 3 (2015). - pp. 839-850. - Elsevier. - ISSN 2351-9894

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