Molecular Fragment Mining for Drug Discovery

dc.contributor.authorBorgelt, Christian
dc.contributor.authorBerthold, Michael R.
dc.contributor.authorPatterson, David E.deu
dc.date.accessioned2013-07-26T07:23:49Zdeu
dc.date.available2013-07-26T07:23:49Zdeu
dc.date.issued2005
dc.description.abstractThe main task of drug discovery is to find novel bioactive molecules, i.e., chemical compounds that, for example, protect human cells against a virus. One way to support solving this task is to analyze a database of known and tested molecules in order to find structural properties of molecules that determine whether a molecule will be active or inactive, so that future chemical tests can be focused on the most promising candidates. A promising approach to this task was presented in [2]: an algorithm for finding molecular fragments that discriminate between active and inactive molecules. In this paper we review this approach as well as two extensions: a special treatment of rings and a method to find fragments with wildcards based on chemical expert knowledge.eng
dc.description.versionpublished
dc.identifier.citationSymbolic and quantitative approaches to reasoning with uncertainty : 8th European Conference, ECSQARU 2005, Barcelona, Spain, July 6 - 8, 2005; proceedings / Lluís Godo (ed.). - Berlin [u.a.] : Springer, 2005. - S. 1002-1013. - (Lecture notes in computer science ; 3571 : Lecture notes in artificial intelligence). - ISBN 978-3-540-27326-4deu
dc.identifier.doi10.1007/11518655_84deu
dc.identifier.ppn391514342deu
dc.identifier.urihttp://kops.uni-konstanz.de/handle/123456789/24073
dc.language.isoengdeu
dc.legacy.dateIssued2013-07-26deu
dc.rightsterms-of-usedeu
dc.rights.urihttps://rightsstatements.org/page/InC/1.0/deu
dc.subject.ddc004deu
dc.titleMolecular Fragment Mining for Drug Discoveryeng
dc.typeINPROCEEDINGSdeu
dspace.entity.typePublication
kops.citation.bibtex
@inproceedings{Borgelt2005Molec-24073,
  year={2005},
  doi={10.1007/11518655_84},
  title={Molecular Fragment Mining for Drug Discovery},
  number={3571},
  isbn={978-3-540-27326-4},
  publisher={Springer Berlin Heidelberg},
  address={Berlin, Heidelberg},
  series={Lecture Notes in Computer Science},
  booktitle={Symbolic and Quantitative Approaches to Reasoning with Uncertainty},
  pages={1002--1013},
  editor={Godo, Lluís},
  author={Borgelt, Christian and Berthold, Michael R. and Patterson, David E.}
}
kops.citation.iso690BORGELT, Christian, Michael R. BERTHOLD, David E. PATTERSON, 2005. Molecular Fragment Mining for Drug Discovery. In: GODO, Lluís, ed.. Symbolic and Quantitative Approaches to Reasoning with Uncertainty. Berlin, Heidelberg: Springer Berlin Heidelberg, 2005, pp. 1002-1013. Lecture Notes in Computer Science. 3571. ISBN 978-3-540-27326-4. Available under: doi: 10.1007/11518655_84deu
kops.citation.iso690BORGELT, Christian, Michael R. BERTHOLD, David E. PATTERSON, 2005. Molecular Fragment Mining for Drug Discovery. In: GODO, Lluís, ed.. Symbolic and Quantitative Approaches to Reasoning with Uncertainty. Berlin, Heidelberg: Springer Berlin Heidelberg, 2005, pp. 1002-1013. Lecture Notes in Computer Science. 3571. ISBN 978-3-540-27326-4. Available under: doi: 10.1007/11518655_84eng
kops.citation.rdf
<rdf:RDF
    xmlns:dcterms="http://purl.org/dc/terms/"
    xmlns:dc="http://purl.org/dc/elements/1.1/"
    xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#"
    xmlns:bibo="http://purl.org/ontology/bibo/"
    xmlns:dspace="http://digital-repositories.org/ontologies/dspace/0.1.0#"
    xmlns:foaf="http://xmlns.com/foaf/0.1/"
    xmlns:void="http://rdfs.org/ns/void#"
    xmlns:xsd="http://www.w3.org/2001/XMLSchema#" > 
  <rdf:Description rdf:about="https://kops.uni-konstanz.de/server/rdf/resource/123456789/24073">
    <dc:creator>Borgelt, Christian</dc:creator>
    <dc:creator>Berthold, Michael R.</dc:creator>
    <dc:creator>Patterson, David E.</dc:creator>
    <dc:contributor>Borgelt, Christian</dc:contributor>
    <dcterms:abstract xml:lang="eng">The main task of drug discovery is to find novel bioactive molecules, i.e., chemical compounds that, for example, protect human cells against a virus. One way to support solving this task is to analyze a database of known and tested molecules in order to find structural properties of molecules that determine whether a molecule will be active or inactive, so that future chemical tests can be focused on the most promising candidates. A promising approach to this task was presented in [2]: an algorithm for finding molecular fragments that discriminate between active and inactive molecules. In this paper we review this approach as well as two extensions: a special treatment of rings and a method to find fragments with wildcards based on chemical expert knowledge.</dcterms:abstract>
    <foaf:homepage rdf:resource="http://localhost:8080/"/>
    <dcterms:bibliographicCitation>Symbolic and quantitative approaches to reasoning with uncertainty : 8th European Conference, ECSQARU 2005, Barcelona, Spain, July 6 - 8, 2005; proceedings / Lluís Godo (ed.). - Berlin [u.a.] : Springer, 2005. - S. 1002-1013. - (Lecture notes in computer science ; 3571 : Lecture notes in artificial intelligence). - ISBN 978-3-540-27326-4</dcterms:bibliographicCitation>
    <dc:contributor>Patterson, David E.</dc:contributor>
    <bibo:uri rdf:resource="http://kops.uni-konstanz.de/handle/123456789/24073"/>
    <dspace:hasBitstream rdf:resource="https://kops.uni-konstanz.de/bitstream/123456789/24073/1/Borgelt_240736.pdf"/>
    <dc:language>eng</dc:language>
    <dcterms:issued>2005</dcterms:issued>
    <dcterms:rights rdf:resource="https://rightsstatements.org/page/InC/1.0/"/>
    <dspace:isPartOfCollection rdf:resource="https://kops.uni-konstanz.de/server/rdf/resource/123456789/36"/>
    <void:sparqlEndpoint rdf:resource="http://localhost/fuseki/dspace/sparql"/>
    <dcterms:hasPart rdf:resource="https://kops.uni-konstanz.de/bitstream/123456789/24073/1/Borgelt_240736.pdf"/>
    <dc:rights>terms-of-use</dc:rights>
    <dcterms:available rdf:datatype="http://www.w3.org/2001/XMLSchema#dateTime">2013-07-26T07:23:49Z</dcterms:available>
    <dcterms:title>Molecular Fragment Mining for Drug Discovery</dcterms:title>
    <dcterms:isPartOf rdf:resource="https://kops.uni-konstanz.de/server/rdf/resource/123456789/36"/>
    <dc:contributor>Berthold, Michael R.</dc:contributor>
    <dc:date rdf:datatype="http://www.w3.org/2001/XMLSchema#dateTime">2013-07-26T07:23:49Z</dc:date>
  </rdf:Description>
</rdf:RDF>
kops.description.openAccessopenaccessgreen
kops.flag.knbibliographytrue
kops.identifier.nbnurn:nbn:de:bsz:352-240736deu
kops.sourcefieldGODO, Lluís, ed.. <i>Symbolic and Quantitative Approaches to Reasoning with Uncertainty</i>. Berlin, Heidelberg: Springer Berlin Heidelberg, 2005, pp. 1002-1013. Lecture Notes in Computer Science. 3571. ISBN 978-3-540-27326-4. Available under: doi: 10.1007/11518655_84deu
kops.sourcefield.plainGODO, Lluís, ed.. Symbolic and Quantitative Approaches to Reasoning with Uncertainty. Berlin, Heidelberg: Springer Berlin Heidelberg, 2005, pp. 1002-1013. Lecture Notes in Computer Science. 3571. ISBN 978-3-540-27326-4. Available under: doi: 10.1007/11518655_84deu
kops.sourcefield.plainGODO, Lluís, ed.. Symbolic and Quantitative Approaches to Reasoning with Uncertainty. Berlin, Heidelberg: Springer Berlin Heidelberg, 2005, pp. 1002-1013. Lecture Notes in Computer Science. 3571. ISBN 978-3-540-27326-4. Available under: doi: 10.1007/11518655_84eng
kops.submitter.emailchristoph.petzmann@uni-konstanz.dedeu
relation.isAuthorOfPublicationf3246f9d-f7ef-459f-9b0a-4ffd7be08597
relation.isAuthorOfPublication56ea9ab6-14a4-493e-8ef1-3c064e0c50a1
relation.isAuthorOfPublication.latestForDiscoveryf3246f9d-f7ef-459f-9b0a-4ffd7be08597
source.bibliographicInfo.fromPage1002
source.bibliographicInfo.seriesNumber3571
source.bibliographicInfo.toPage1013
source.contributor.editorGodo, Lluís
source.identifier.isbn978-3-540-27326-4
source.publisherSpringer Berlin Heidelberg
source.publisher.locationBerlin, Heidelberg
source.relation.ispartofseriesLecture Notes in Computer Science
source.titleSymbolic and Quantitative Approaches to Reasoning with Uncertainty

Dateien

Originalbündel

Gerade angezeigt 1 - 1 von 1
Vorschaubild nicht verfügbar
Name:
Borgelt_240736.pdf
Größe:
310.18 KB
Format:
Adobe Portable Document Format
Borgelt_240736.pdf
Borgelt_240736.pdfGröße: 310.18 KBDownloads: 256

Lizenzbündel

Gerade angezeigt 1 - 1 von 1
Vorschaubild nicht verfügbar
Name:
license.txt
Größe:
1.92 KB
Format:
Plain Text
Beschreibung:
license.txt
license.txtGröße: 1.92 KBDownloads: 0