Lake Sedimentary DNA Research on Past Terrestrial and Aquatic Biodiversity : Overview and Recommendations

Kurzanzeige
dc.contributor.authorCapo, Eric
dc.contributor.authorGiguet-Covex, Charline
dc.contributor.authorRouillard, Alexandra
dc.contributor.authorNota, Kevin
dc.contributor.authorHeintzman, Peter D.
dc.contributor.authorVuillemin, Aurèle
dc.contributor.authorIbrahim, Anan
dc.contributor.authorCoolen, Marco J. L.
dc.contributor.authorEpp, Laura S.
dc.contributor.authorDomaizon, Isabelle
dc.contributor.authorParducci, Laura
dc.date.accessioned2021-03-18T10:01:37Z
dc.date.available2021-03-18T10:01:37Z
dc.date.issued2021-03eng
dc.description.abstractThe use of lake sedimentary DNA to track the long-term changes in both terrestrial and aquatic biota is a rapidly advancing field in paleoecological research. Although largely applied nowadays, knowledge gaps remain in this field and there is therefore still research to be conducted to ensure the reliability of the sedimentary DNA signal. Building on the most recent literature and seven original case studies, we synthesize the state-of-the-art analytical procedures for effective sampling, extraction, amplification, quantification and/or generation of DNA inventories from sedimentary ancient DNA (sedaDNA) via high-throughput sequencing technologies. We provide recommendations based on current knowledge and best practises.eng
dc.description.versionpublishedde
dc.identifier.doi10.3390/quat4010006eng
dc.identifier.ppn1751883841
dc.identifier.urihttps://kops.uni-konstanz.de/handle/123456789/53186
dc.language.isoengeng
dc.rightsAttribution 4.0 International
dc.rights.urihttp://creativecommons.org/licenses/by/4.0/
dc.subjectsedimentary ancient DNA; sedimentary DNA; lake sediments; paleolimnology; paleoecology; paleogenetics; paleogenomics; metabarcoding; metagenomics; biodiversityeng
dc.subject.ddc570eng
dc.titleLake Sedimentary DNA Research on Past Terrestrial and Aquatic Biodiversity : Overview and Recommendationseng
dc.typeJOURNAL_ARTICLEde
dspace.entity.typePublication
kops.citation.bibtex
@article{Capo2021-03Sedim-53186,
  year={2021},
  doi={10.3390/quat4010006},
  title={Lake Sedimentary DNA Research on Past Terrestrial and Aquatic Biodiversity : Overview and Recommendations},
  number={1},
  volume={4},
  journal={Quaternary},
  author={Capo, Eric and Giguet-Covex, Charline and Rouillard, Alexandra and Nota, Kevin and Heintzman, Peter D. and Vuillemin, Aurèle and Ibrahim, Anan and Coolen, Marco J. L. and Epp, Laura S. and Domaizon, Isabelle and Parducci, Laura},
  note={Article Number: 6}
}
kops.citation.iso690CAPO, Eric, Charline GIGUET-COVEX, Alexandra ROUILLARD, Kevin NOTA, Peter D. HEINTZMAN, Aurèle VUILLEMIN, Anan IBRAHIM, Marco J. L. COOLEN, Laura S. EPP, Isabelle DOMAIZON, Laura PARDUCCI, 2021. Lake Sedimentary DNA Research on Past Terrestrial and Aquatic Biodiversity : Overview and Recommendations. In: Quaternary. MDPI. 2021, 4(1), 6. eISSN 2571-550X. Available under: doi: 10.3390/quat4010006deu
kops.citation.iso690CAPO, Eric, Charline GIGUET-COVEX, Alexandra ROUILLARD, Kevin NOTA, Peter D. HEINTZMAN, Aurèle VUILLEMIN, Anan IBRAHIM, Marco J. L. COOLEN, Laura S. EPP, Isabelle DOMAIZON, Laura PARDUCCI, 2021. Lake Sedimentary DNA Research on Past Terrestrial and Aquatic Biodiversity : Overview and Recommendations. In: Quaternary. MDPI. 2021, 4(1), 6. eISSN 2571-550X. Available under: doi: 10.3390/quat4010006eng
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