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B80 raw sequences underlying Genbank OQ798221-OQ798795 and associated B80 haplotype reference library

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2023

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Core Facility der Universität Konstanz
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Published

Zusammenfassung

Data relevant for: Breakdown of self-incompatibility due to genetic interaction between a specific S-allele and an unlinked modifier. Nature Communications 2023.

These are sequence trace data with manual base calls for Genbank accessions OQ798221-OQ798795 and a reference library of B80 haplotypes. Sequences are of the S-locus linked gene B80 (aka PUB8, U-box domain protein At4g21350), which can be used to genotype the S-locus owing to its close linkage (see linked papers). Haplotype identification is based on a B80 library originally developed by Barbara Mable (original library at https://doi.org/10.5061/dryad.832t8). The B80 refernce library we provide here is an update of the original library (we added H127, H128, H129 and H130).

Sequence names correspond to F1 progeny for which SC-index values (measure of self-compatibility) is available, and generally follow the following scheme.

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Fachgebiet (DDC)
570 Biowissenschaften, Biologie

Schlagwörter

Genetics not elsewhere classified, Gene mapping, Molecular evolution

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Breakdown of self-incompatibility due to genetic interaction between a specific S-allele and an unlinked modifier
(2023) Li, Yan; Mamonova, Ekaterina; Köhler, Nadja; van Kleunen, Mark; Stift, Marc
Erschienen in: Nature Communications. Springer. 2023, 14(1), 3420. eISSN 2041-1723. Verfügbar unter: doi: 10.1038/s41467-023-38802-0
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ISO 690STIFT, Marc, Yan LI, 2023. B80 raw sequences underlying Genbank OQ798221-OQ798795 and associated B80 haplotype reference library
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