Datensatz: B80 raw sequences underlying Genbank OQ798221-OQ798795 and associated B80 haplotype reference library
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Data relevant for: Breakdown of self-incompatibility due to genetic interaction between a specific S-allele and an unlinked modifier. Nature Communications 2023.
These are sequence trace data with manual base calls for Genbank accessions OQ798221-OQ798795 and a reference library of B80 haplotypes. Sequences are of the S-locus linked gene B80 (aka PUB8, U-box domain protein At4g21350), which can be used to genotype the S-locus owing to its close linkage (see linked papers). Haplotype identification is based on a B80 library originally developed by Barbara Mable (original library at https://doi.org/10.5061/dryad.832t8). The B80 refernce library we provide here is an update of the original library (we added H127, H128, H129 and H130).
Sequence names correspond to F1 progeny for which SC-index values (measure of self-compatibility) is available, and generally follow the following scheme.
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STIFT, Marc, Yan LI, 2023. B80 raw sequences underlying Genbank OQ798221-OQ798795 and associated B80 haplotype reference libraryBibTex
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