Datensatz: Fungus and plant sedimentary ancient DNA metabarcoding data from five lakes in Siberia
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Datum der Erstveröffentlichung
October 15, 2025
Autor:innen
von Hippel, Barbara
Stoof-Leichsenring, Kathleen R.
Schulte, Luise
Biskaborn, Boris K.
Diekmann, Bernhard
Melles, Martin
Pestryakova, Luidmila
Herzschuh, Ulrike
Andere Beitragende
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Angaben zur Forschungsförderung
European Union (EU): Grant Agreement No. 772852
Institutionen der Bundesrepublik Deutschland: 03F0830A
Institutionen der Bundesrepublik Deutschland: 03F0830A
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Core Facility der Universität Konstanz
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Publikationsstatus
Published
Zusammenfassung
Here we provide data on lake sediment metabarcoding on sedimentary ancient DNA (sedaDNA) from five lake cores from Siberia. Our dataset includes 70 sediment core samples spanning the last about 47.000 years. We applied a PCR-based approach called metabarcoding to amplify specific DNA target sequences: for fungus metabarcoding, we used the ITS marker alongside with the p6 loop trnL chloroplast marker for vegetation metabarcoding. The amplicons were analysed towards their composition with Next Generation Sequencing on 5 sequencing runs (APMG-17, APMG-20 and ATBH-2 for the fungus data; APMG-12 and APMG-29 for the vegetation). The data were used in the publication of von Hippel et al. (2022, Quaternary Science Reviews, accepted). All samples marked with asterisks in the *samples_ages files were not included in the publication.
Zusammenfassung in einer weiteren Sprache
Fachgebiet (DDC)
570 Biowissenschaften, Biologie
Schlagwörter
ITS marker, metabarcoding, sedimentary ancient DNA, Siberia, trnL P6 loop, FOS: Earth and related environmental sciences, FOS: Earth and related environmental sciences
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VON HIPPEL, Barbara, Kathleen R. STOOF-LEICHSENRING, Luise SCHULTE, Peter A. SEEBER, Laura S. EPP, Boris K. BISKABORN, Bernhard DIEKMANN, Martin MELLES, Luidmila PESTRYAKOVA, Ulrike HERZSCHUH, 2025. Fungus and plant sedimentary ancient DNA metabarcoding data from five lakes in SiberiaBibTex
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</rdf:RDF>Kommentar zur Publikation
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