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High-quality-draft genome sequence of the fermenting bacterium Anaerobium acetethylicum type strain GluBS11T (DSM 29698)

High-quality-draft genome sequence of the fermenting bacterium Anaerobium acetethylicum type strain GluBS11T (DSM 29698)

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PATIL, Yogita, Nicolai MÜLLER, Bernhard SCHINK, William B. WHITMAN, Marcel HUNTEMANN, Alicia CLUM, Manoj PILLAY, Krishnaveni PALANIAPPAN, Tanja WOYKE, Madan JUNGHARE, 2017. High-quality-draft genome sequence of the fermenting bacterium Anaerobium acetethylicum type strain GluBS11T (DSM 29698). In: Standards in Genomic Sciences. 12(1), 24. eISSN 1944-3277

@article{Patil2017High--38634, title={High-quality-draft genome sequence of the fermenting bacterium Anaerobium acetethylicum type strain GluBS11T (DSM 29698)}, year={2017}, doi={10.1186/s40793-017-0236-4}, number={1}, volume={12}, journal={Standards in Genomic Sciences}, author={Patil, Yogita and Müller, Nicolai and Schink, Bernhard and Whitman, William B. and Huntemann, Marcel and Clum, Alicia and Pillay, Manoj and Palaniappan, Krishnaveni and Woyke, Tanja and Junghare, Madan}, note={Article Number: 24} }

<rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bibo="http://purl.org/ontology/bibo/" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:xsd="http://www.w3.org/2001/XMLSchema#" > <rdf:Description rdf:about="https://kops.uni-konstanz.de/rdf/resource/123456789/38634"> <dc:contributor>Patil, Yogita</dc:contributor> <dc:date rdf:datatype="http://www.w3.org/2001/XMLSchema#dateTime">2017-04-27T08:42:13Z</dc:date> <dc:creator>Schink, Bernhard</dc:creator> <dcterms:title>High-quality-draft genome sequence of the fermenting bacterium Anaerobium acetethylicum type strain GluBS11T (DSM 29698)</dcterms:title> <dc:contributor>Woyke, Tanja</dc:contributor> <dc:contributor>Clum, Alicia</dc:contributor> <dc:creator>Palaniappan, Krishnaveni</dc:creator> <dc:contributor>Schink, Bernhard</dc:contributor> <dc:creator>Pillay, Manoj</dc:creator> <dc:contributor>Huntemann, Marcel</dc:contributor> <dc:creator>Müller, Nicolai</dc:creator> <dc:contributor>Palaniappan, Krishnaveni</dc:contributor> <dc:creator>Junghare, Madan</dc:creator> <dc:creator>Huntemann, Marcel</dc:creator> <dc:creator>Woyke, Tanja</dc:creator> <dc:contributor>Junghare, Madan</dc:contributor> <dc:contributor>Müller, Nicolai</dc:contributor> <dc:language>eng</dc:language> <dc:creator>Clum, Alicia</dc:creator> <dcterms:issued>2017</dcterms:issued> <dcterms:available rdf:datatype="http://www.w3.org/2001/XMLSchema#dateTime">2017-04-27T08:42:13Z</dcterms:available> <dcterms:abstract xml:lang="eng">Anaerobium acetethylicum strain GluBS11(T) belongs to the family Lachnospiraceae within the order Clostridiales. It is a Gram-positive, non-motile and strictly anaerobic bacterium isolated from biogas slurry that was originally enriched with gluconate as carbon source (Patil, et al., Int J Syst Evol Microbiol 65:3289-3296, 2015). Here we describe the draft genome sequence of strain GluBS11(T) and provide a detailed insight into its physiological and metabolic features. The draft genome sequence generated 4,609,043 bp, distributed among 105 scaffolds assembled using the SPAdes genome assembler method. It comprises in total 4,132 genes, of which 4,008 were predicted to be protein coding genes, 124 RNA genes and 867 pseudogenes. The G + C content was 43.51 mol %. The annotated genome of strain GluBS11(T) contains putative genes coding for the pentose phosphate pathway, the Embden-Meyerhoff-Parnas pathway, the Entner-Doudoroff pathway and the tricarboxylic acid cycle. The genome revealed the presence of most of the necessary genes required for the fermentation of glucose and gluconate to acetate, ethanol, and hydrogen gas. However, a candidate gene for production of formate was not identified.</dcterms:abstract> <dc:creator>Whitman, William B.</dc:creator> <dc:contributor>Whitman, William B.</dc:contributor> <dcterms:rights rdf:resource="http://nbn-resolving.de/urn:nbn:de:bsz:352-20150914100631302-4485392-8"/> <bibo:uri rdf:resource="https://kops.uni-konstanz.de/handle/123456789/38634"/> <dc:creator>Patil, Yogita</dc:creator> <dc:contributor>Pillay, Manoj</dc:contributor> </rdf:Description> </rdf:RDF>

Dateiabrufe seit 27.04.2017 (Informationen über die Zugriffsstatistik)

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