Software support for SBGN maps : SBGN-ML and LibSBGN

Cite This

Files in this item

Checksum: MD5:e88a98d3795c2be7808ac5f6a259f6ad

VAN IERSEL, Martijn P., Alice C. VILLEGER, Tobias CZAUDERNA, Sarah E. BOYD, Frank T. BERGMANN, Augustin LUNA, Emek DEMIR, Anatoly SOROKIN, Ugur DOGRUSOZ, Falk SCHREIBER, 2012. Software support for SBGN maps : SBGN-ML and LibSBGN. In: Bioinformatics. 28(15), pp. 2016-2021. ISSN 1367-4803. eISSN 1460-2059. Available under: doi: 10.1093/bioinformatics/bts270

@article{vanIersel2012-08-01Softw-38524, title={Software support for SBGN maps : SBGN-ML and LibSBGN}, year={2012}, doi={10.1093/bioinformatics/bts270}, number={15}, volume={28}, issn={1367-4803}, journal={Bioinformatics}, pages={2016--2021}, author={van Iersel, Martijn P. and Villeger, Alice C. and Czauderna, Tobias and Boyd, Sarah E. and Bergmann, Frank T. and Luna, Augustin and Demir, Emek and Sorokin, Anatoly and Dogrusoz, Ugur and Schreiber, Falk} }

<rdf:RDF xmlns:dcterms="" xmlns:dc="" xmlns:rdf="" xmlns:bibo="" xmlns:dspace="" xmlns:foaf="" xmlns:void="" xmlns:xsd="" > <rdf:Description rdf:about=""> <dc:contributor>Dogrusoz, Ugur</dc:contributor> <dc:contributor>van Iersel, Martijn P.</dc:contributor> <dc:contributor>Boyd, Sarah E.</dc:contributor> <dc:creator>Czauderna, Tobias</dc:creator> <dc:contributor>Luna, Augustin</dc:contributor> <dc:creator>Dogrusoz, Ugur</dc:creator> <dcterms:issued>2012-08-01</dcterms:issued> <dc:creator>Bergmann, Frank T.</dc:creator> <dc:contributor>Czauderna, Tobias</dc:contributor> <dcterms:rights rdf:resource=""/> <dc:language>eng</dc:language> <dc:creator>Villeger, Alice C.</dc:creator> <dc:creator>Luna, Augustin</dc:creator> <dc:creator>Sorokin, Anatoly</dc:creator> <void:sparqlEndpoint rdf:resource="http://localhost/fuseki/dspace/sparql"/> <dcterms:abstract xml:lang="eng">LibSBGN is a software library for reading, writing and manipulating Systems Biology Graphical Notation (SBGN) maps stored using the recently developed SBGN-ML file format. The library (available in C++ and Java) makes it easy for developers to add SBGN support to their tools, whereas the file format facilitates the exchange of maps between compatible software applications. The library also supports validation of maps, which simplifies the task of ensuring compliance with the detailed SBGN specifications. With this effort we hope to increase the adoption of SBGN in bioinformatics tools, ultimately enabling more researchers to visualize biological knowledge in a precise and unambiguous manner.</dcterms:abstract> <dc:creator>Boyd, Sarah E.</dc:creator> <dc:contributor>Demir, Emek</dc:contributor> <dc:rights>Attribution-NonCommercial 3.0 Unported</dc:rights> <dc:date rdf:datatype="">2017-04-19T09:42:58Z</dc:date> <dcterms:isPartOf rdf:resource=""/> <foaf:homepage rdf:resource="http://localhost:8080/jspui"/> <dc:contributor>Bergmann, Frank T.</dc:contributor> <bibo:uri rdf:resource=""/> <dspace:isPartOfCollection rdf:resource=""/> <dc:creator>Demir, Emek</dc:creator> <dcterms:title>Software support for SBGN maps : SBGN-ML and LibSBGN</dcterms:title> <dspace:hasBitstream rdf:resource=""/> <dcterms:hasPart rdf:resource=""/> <dc:contributor>Schreiber, Falk</dc:contributor> <dc:creator>Schreiber, Falk</dc:creator> <dc:contributor>Sorokin, Anatoly</dc:contributor> <dcterms:available rdf:datatype="">2017-04-19T09:42:58Z</dcterms:available> <dc:creator>van Iersel, Martijn P.</dc:creator> <dc:contributor>Villeger, Alice C.</dc:contributor> </rdf:Description> </rdf:RDF>

Downloads since Apr 19, 2017 (Information about access statistics)

Van-Iersel_0-396367.pdf 252

This item appears in the following Collection(s)

Attribution-NonCommercial 3.0 Unported Except where otherwise noted, this item's license is described as Attribution-NonCommercial 3.0 Unported

Search KOPS


My Account