Type of Publication: | Journal article |
Publication status: | Published |
URI (citable link): | http://nbn-resolving.de/urn:nbn:de:bsz:352-0-309862 |
Author: | Junghare, Madan; Patil, Yogita; Schink, Bernhard |
Year of publication: | 2015 |
Published in: | Standards in Genomic Sciences ; 10 (2015). - 90. - eISSN 1944-3277 |
DOI (citable link): | https://dx.doi.org/10.1186/s40793-015-0079-9 |
Summary: |
Azoarcus sp. strain PA01T belongs to the genus Azoarcus, of the family Rhodocyclaceae within the class Betaproteobacteria. It is a facultatively anaerobic, mesophilic, non-motile, Gram-stain negative, non-spore-forming, short rod-shaped bacterium that was isolated from a wastewater treatment plant in Constance, Germany. It is of interest because of its ability to degrade o-phthalate and a wide variety of aromatic compounds with nitrate as an electron acceptor. Elucidation of the o-phthalate degradation pathway may help to improve the treatment of phthalate-containing wastes in the future. Here, we describe the features of this organism, together with the draft genome sequence information and annotation. The draft genome consists of 4 contigs with 3,908,301 bp and an overall G + C content of 66.08 %. Out of 3,712 total genes predicted, 3,625 genes code for proteins and 87 genes for RNAs. The majority of the protein-encoding genes (83.51 %) were assigned a putative function while those remaining were annotated as hypothetical proteins.
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Subject (DDC): | 570 Biosciences, Biology |
Keywords: | Azoarcus sp. strain PA01T, o-phthalate degradation, Rhodocyclaceae, Betaproteobacteria, anaerobic degradation, wastewater treatment plant, pollutant |
Link to License: | In Copyright |
Bibliography of Konstanz: | Yes |
JUNGHARE, Madan, Yogita PATIL, Bernhard SCHINK, 2015. Draft genome sequence of a nitrate-reducing, o-phthalate degrading bacterium, Azoarcus sp. strain PA01T. In: Standards in Genomic Sciences. 10, 90. eISSN 1944-3277. Available under: doi: 10.1186/s40793-015-0079-9
@article{Junghare2015Draft-32259, title={Draft genome sequence of a nitrate-reducing, o-phthalate degrading bacterium, Azoarcus sp. strain PA01T}, year={2015}, doi={10.1186/s40793-015-0079-9}, volume={10}, journal={Standards in Genomic Sciences}, author={Junghare, Madan and Patil, Yogita and Schink, Bernhard}, note={Article Number: 90} }
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