Expanding Tara Oceans Protocols for Underway, Ecosystemic Sampling of the Ocean-Atmosphere Interface During Tara Pacific Expedition (2016–2018)

Loading...
Thumbnail Image
Date
2019
Authors
Gorsky, Gabriel
Bourdin, Guillaume
Lombard, Fabien
Pedrotti, Maria Luiza
Audrain, Samuel
Bin, Nicolas
Boss, Emmanuel
Bowler, Chris
Cassar, Nicolas
Editors
Contact
Journal ISSN
Electronic ISSN
ISBN
Bibliographical data
Publisher
Series
DOI (citable link)
ArXiv-ID
International patent number
Link to the license
EU project number
Project
Open Access publication
Collections
Restricted until
Title in another language
Research Projects
Organizational Units
Journal Issue
Publication type
Journal article
Publication status
Published
Published in
Frontiers in Marine Science ; 6 (2019). - 750. - eISSN 2296-7745
Abstract
Interactions between the ocean and the atmosphere occur at the air-sea interface through the transfer of momentum, heat, gases and particulate matter, and through the impact of the upper-ocean biology on the composition and radiative properties of this boundary layer. The Tara Pacific expedition, launched in May 2016 aboard the schooner Tara, was a 29-month exploration with the dual goals to study the ecology of reef ecosystems along ecological gradients in the Pacific Ocean and to assess inter-island and open ocean surface plankton and neuston community structures. In addition, key atmospheric properties were measured to study links between the two boundary layer properties. A major challenge for the open ocean sampling was the lack of ship-time available for work at “stations”. The time constraint led us to develop new underway sampling approaches to optimize physical, chemical, optical, and genomic methods to capture the entire community structure of the surface layers, from viruses to metazoans in their oceanographic and atmospheric physicochemical context. An international scientific consortium was put together to analyze the samples, generate data, and develop datasets in coherence with the existing Tara Oceans database. Beyond adapting the extensive Tara Oceans sampling protocols for high-resolution underway sampling, the key novelties compared to Tara Oceans’ global assessment of plankton include the measurement of (i) surface plankton and neuston biogeography and functional diversity; (ii) bioactive trace metals distribution at the ocean surface and metal-dependent ecosystem structures; (iii) marine aerosols, including biological entities; (iv) geography, nature and colonization of microplastic; and (v) high-resolution underway assessment of net community production via equilibrator inlet mass spectrometry. We are committed to share the data collected during this expedition, making it an important resource important resource to address a variety of scientific questions.
Summary in another language
Subject (DDC)
570 Biosciences, Biology
Keywords
neuston/plankton genomics/taxonomy/imaging, aerosols, NCP, IOP, trace metals, microplastic
Conference
Review
undefined / . - undefined, undefined. - (undefined; undefined)
Cite This
ISO 690GORSKY, Gabriel, Guillaume BOURDIN, Fabien LOMBARD, Maria Luiza PEDROTTI, Samuel AUDRAIN, Nicolas BIN, Emmanuel BOSS, Chris BOWLER, Nicolas CASSAR, Christian R. VOOLSTRA, 2019. Expanding Tara Oceans Protocols for Underway, Ecosystemic Sampling of the Ocean-Atmosphere Interface During Tara Pacific Expedition (2016–2018). In: Frontiers in Marine Science. 6, 750. eISSN 2296-7745. Available under: doi: 10.3389/fmars.2019.00750
BibTex
@article{Gorsky2019-12-11Expan-48080,
  year={2019},
  doi={10.3389/fmars.2019.00750},
  title={Expanding Tara Oceans Protocols for Underway, Ecosystemic Sampling of the Ocean-Atmosphere Interface During Tara Pacific Expedition (2016–2018)},
  volume={6},
  journal={Frontiers in Marine Science},
  author={Gorsky, Gabriel and Bourdin, Guillaume and Lombard, Fabien and Pedrotti, Maria Luiza and Audrain, Samuel and Bin, Nicolas and Boss, Emmanuel and Bowler, Chris and Cassar, Nicolas and Voolstra, Christian R.},
  note={Article Number: 750}
}
RDF
<rdf:RDF
    xmlns:dcterms="http://purl.org/dc/terms/"
    xmlns:dc="http://purl.org/dc/elements/1.1/"
    xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#"
    xmlns:bibo="http://purl.org/ontology/bibo/"
    xmlns:dspace="http://digital-repositories.org/ontologies/dspace/0.1.0#"
    xmlns:foaf="http://xmlns.com/foaf/0.1/"
    xmlns:void="http://rdfs.org/ns/void#"
    xmlns:xsd="http://www.w3.org/2001/XMLSchema#" > 
  <rdf:Description rdf:about="https://kops.uni-konstanz.de/server/rdf/resource/123456789/48080">
    <dc:creator>Bowler, Chris</dc:creator>
    <dc:contributor>Bourdin, Guillaume</dc:contributor>
    <dcterms:available rdf:datatype="http://www.w3.org/2001/XMLSchema#dateTime">2019-12-17T17:55:12Z</dcterms:available>
    <void:sparqlEndpoint rdf:resource="http://localhost/fuseki/dspace/sparql"/>
    <dc:contributor>Audrain, Samuel</dc:contributor>
    <bibo:uri rdf:resource="https://kops.uni-konstanz.de/handle/123456789/48080"/>
    <dcterms:abstract xml:lang="eng">Interactions between the ocean and the atmosphere occur at the air-sea interface through the transfer of momentum, heat, gases and particulate matter, and through the impact of the upper-ocean biology on the composition and radiative properties of this boundary layer. The Tara Pacific expedition, launched in May 2016 aboard the schooner Tara, was a 29-month exploration with the dual goals to study the ecology of reef ecosystems along ecological gradients in the Pacific Ocean and to assess inter-island and open ocean surface plankton and neuston community structures. In addition, key atmospheric properties were measured to study links between the two boundary layer properties. A major challenge for the open ocean sampling was the lack of ship-time available for work at “stations”. The time constraint led us to develop new underway sampling approaches to optimize physical, chemical, optical, and genomic methods to capture the entire community structure of the surface layers, from viruses to metazoans in their oceanographic and atmospheric physicochemical context. An international scientific consortium was put together to analyze the samples, generate data, and develop datasets in coherence with the existing Tara Oceans database. Beyond adapting the extensive Tara Oceans sampling protocols for high-resolution underway sampling, the key novelties compared to Tara Oceans’ global assessment of plankton include the measurement of (i) surface plankton and neuston biogeography and functional diversity; (ii) bioactive trace metals distribution at the ocean surface and metal-dependent ecosystem structures; (iii) marine aerosols, including biological entities; (iv) geography, nature and colonization of microplastic; and (v) high-resolution underway assessment of net community production via equilibrator inlet mass spectrometry. We are committed to share the data collected during this expedition, making it an important resource important resource to address a variety of scientific questions.</dcterms:abstract>
    <dcterms:title>Expanding Tara Oceans Protocols for Underway, Ecosystemic Sampling of the Ocean-Atmosphere Interface During Tara Pacific Expedition (2016–2018)</dcterms:title>
    <dc:creator>Boss, Emmanuel</dc:creator>
    <dc:contributor>Pedrotti, Maria Luiza</dc:contributor>
    <dc:contributor>Lombard, Fabien</dc:contributor>
    <dc:creator>Lombard, Fabien</dc:creator>
    <dc:creator>Audrain, Samuel</dc:creator>
    <dc:contributor>Bin, Nicolas</dc:contributor>
    <dc:creator>Pedrotti, Maria Luiza</dc:creator>
    <dc:contributor>Cassar, Nicolas</dc:contributor>
    <dc:contributor>Boss, Emmanuel</dc:contributor>
    <dc:creator>Cassar, Nicolas</dc:creator>
    <dc:creator>Gorsky, Gabriel</dc:creator>
    <dc:creator>Voolstra, Christian R.</dc:creator>
    <dc:language>eng</dc:language>
    <dcterms:rights rdf:resource="http://creativecommons.org/licenses/by/4.0/"/>
    <dspace:isPartOfCollection rdf:resource="https://kops.uni-konstanz.de/server/rdf/resource/123456789/28"/>
    <dspace:hasBitstream rdf:resource="https://kops.uni-konstanz.de/bitstream/123456789/48080/1/Gorsky_2-l7aba72w0ivu6.pdf"/>
    <dc:contributor>Gorsky, Gabriel</dc:contributor>
    <dc:creator>Bourdin, Guillaume</dc:creator>
    <dc:rights>Attribution 4.0 International</dc:rights>
    <dcterms:issued>2019-12-11</dcterms:issued>
    <dc:contributor>Bowler, Chris</dc:contributor>
    <dc:contributor>Voolstra, Christian R.</dc:contributor>
    <foaf:homepage rdf:resource="http://localhost:8080/"/>
    <dcterms:isPartOf rdf:resource="https://kops.uni-konstanz.de/server/rdf/resource/123456789/28"/>
    <dcterms:hasPart rdf:resource="https://kops.uni-konstanz.de/bitstream/123456789/48080/1/Gorsky_2-l7aba72w0ivu6.pdf"/>
    <dc:creator>Bin, Nicolas</dc:creator>
    <dc:date rdf:datatype="http://www.w3.org/2001/XMLSchema#dateTime">2019-12-17T17:55:12Z</dc:date>
  </rdf:Description>
</rdf:RDF>
Internal note
xmlui.Submission.submit.DescribeStep.inputForms.label.kops_note_fromSubmitter
Contact
URL of original publication
Test date of URL
Examination date of dissertation
Method of financing
Comment on publication
Alliance license
Corresponding Authors der Uni Konstanz vorhanden
International Co-Authors
Bibliography of Konstanz
Yes
Refereed
Yes