Recovering a Chemotopic Feature Space from a Group of Fruit Fly Antenna Chemosensors

dc.contributor.authorStrauch, Martin
dc.contributor.authorMukunda, Latha
dc.contributor.authorLüdke, Alja
dc.contributor.authorGalizia, C. Giovanni
dc.contributor.authorMerhof, Dorit
dc.date.accessioned2019-03-18T15:47:42Z
dc.date.available2019-03-18T15:47:42Z
dc.date.issued2018-10eng
dc.description.abstractThe ensemble of odorant receptors on the antenna of the fruit fly Drosophila melanogaster acts as an encoder for chemical molecules. Chemically similar odorants elicit activity in similar subsets of the receptors, spanning a so-called chemotopic feature space that enables chemical similarity search. A compound signal of receptor activity can be read out by calcium imaging of the antenna, yet without revealing corresponding receptors on different antennae. Employing Canonical Correlation Analysis (CCA) for multiple sets, we show that a consensus feature space can nevertheless be recovered from a group of variable antenna sensors that all respond to a common sequence of odorants. In the chemotopic consensus feature space, properties of novel odorants can be inferred, demonstrating how fruit fly antenna chemosensors may be employed as an alternative to electronic noses.eng
dc.description.versionpublishedde
dc.identifier.doi10.1109/BIBE.2018.00039eng
dc.identifier.urihttps://kops.uni-konstanz.de/handle/123456789/45513
dc.language.isoengeng
dc.subject.ddc570eng
dc.titleRecovering a Chemotopic Feature Space from a Group of Fruit Fly Antenna Chemosensorseng
dc.typeINPROCEEDINGSde
dspace.entity.typePublication
kops.citation.bibtex
@inproceedings{Strauch2018-10Recov-45513,
  year={2018},
  doi={10.1109/BIBE.2018.00039},
  title={Recovering a Chemotopic Feature Space from a Group of Fruit Fly Antenna Chemosensors},
  isbn={978-1-5386-6217-5},
  publisher={IEEE},
  address={Piscataway, NJ},
  booktitle={2018 IEEE 18th International Conference on Bioinformatics and Bioengineering (BIBE) : Proceedings},
  pages={163--169},
  author={Strauch, Martin and Mukunda, Latha and Lüdke, Alja and Galizia, C. Giovanni and Merhof, Dorit}
}
kops.citation.iso690STRAUCH, Martin, Latha MUKUNDA, Alja LÜDKE, C. Giovanni GALIZIA, Dorit MERHOF, 2018. Recovering a Chemotopic Feature Space from a Group of Fruit Fly Antenna Chemosensors. 2018 IEEE 18th International Conference on Bioinformatics and Bioengineering (BIBE). Taichung, Taiwan, 29. Okt. 2018 - 31. Okt. 2018. In: 2018 IEEE 18th International Conference on Bioinformatics and Bioengineering (BIBE) : Proceedings. Piscataway, NJ: IEEE, 2018, pp. 163-169. eISSN 2471-7819. ISBN 978-1-5386-6217-5. Available under: doi: 10.1109/BIBE.2018.00039deu
kops.citation.iso690STRAUCH, Martin, Latha MUKUNDA, Alja LÜDKE, C. Giovanni GALIZIA, Dorit MERHOF, 2018. Recovering a Chemotopic Feature Space from a Group of Fruit Fly Antenna Chemosensors. 2018 IEEE 18th International Conference on Bioinformatics and Bioengineering (BIBE). Taichung, Taiwan, Oct 29, 2018 - Oct 31, 2018. In: 2018 IEEE 18th International Conference on Bioinformatics and Bioengineering (BIBE) : Proceedings. Piscataway, NJ: IEEE, 2018, pp. 163-169. eISSN 2471-7819. ISBN 978-1-5386-6217-5. Available under: doi: 10.1109/BIBE.2018.00039eng
kops.citation.rdf
<rdf:RDF
    xmlns:dcterms="http://purl.org/dc/terms/"
    xmlns:dc="http://purl.org/dc/elements/1.1/"
    xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#"
    xmlns:bibo="http://purl.org/ontology/bibo/"
    xmlns:dspace="http://digital-repositories.org/ontologies/dspace/0.1.0#"
    xmlns:foaf="http://xmlns.com/foaf/0.1/"
    xmlns:void="http://rdfs.org/ns/void#"
    xmlns:xsd="http://www.w3.org/2001/XMLSchema#" > 
  <rdf:Description rdf:about="https://kops.uni-konstanz.de/server/rdf/resource/123456789/45513">
    <dc:creator>Mukunda, Latha</dc:creator>
    <dspace:isPartOfCollection rdf:resource="https://kops.uni-konstanz.de/server/rdf/resource/123456789/28"/>
    <dc:contributor>Strauch, Martin</dc:contributor>
    <bibo:uri rdf:resource="https://kops.uni-konstanz.de/handle/123456789/45513"/>
    <dc:date rdf:datatype="http://www.w3.org/2001/XMLSchema#dateTime">2019-03-18T15:47:42Z</dc:date>
    <foaf:homepage rdf:resource="http://localhost:8080/"/>
    <dc:creator>Lüdke, Alja</dc:creator>
    <dcterms:title>Recovering a Chemotopic Feature Space from a Group of Fruit Fly Antenna Chemosensors</dcterms:title>
    <dc:contributor>Galizia, C. Giovanni</dc:contributor>
    <dc:creator>Galizia, C. Giovanni</dc:creator>
    <dcterms:available rdf:datatype="http://www.w3.org/2001/XMLSchema#dateTime">2019-03-18T15:47:42Z</dcterms:available>
    <void:sparqlEndpoint rdf:resource="http://localhost/fuseki/dspace/sparql"/>
    <dc:contributor>Lüdke, Alja</dc:contributor>
    <dcterms:issued>2018-10</dcterms:issued>
    <dc:creator>Merhof, Dorit</dc:creator>
    <dc:language>eng</dc:language>
    <dcterms:isPartOf rdf:resource="https://kops.uni-konstanz.de/server/rdf/resource/123456789/28"/>
    <dc:contributor>Merhof, Dorit</dc:contributor>
    <dc:contributor>Mukunda, Latha</dc:contributor>
    <dc:creator>Strauch, Martin</dc:creator>
    <dcterms:abstract xml:lang="eng">The ensemble of odorant receptors on the antenna of the fruit fly Drosophila melanogaster acts as an encoder for chemical molecules. Chemically similar odorants elicit activity in similar subsets of the receptors, spanning a so-called chemotopic feature space that enables chemical similarity search. A compound signal of receptor activity can be read out by calcium imaging of the antenna, yet without revealing corresponding receptors on different antennae. Employing Canonical Correlation Analysis (CCA) for multiple sets, we show that a consensus feature space can nevertheless be recovered from a group of variable antenna sensors that all respond to a common sequence of odorants. In the chemotopic consensus feature space, properties of novel odorants can be inferred, demonstrating how fruit fly antenna chemosensors may be employed as an alternative to electronic noses.</dcterms:abstract>
  </rdf:Description>
</rdf:RDF>
kops.conferencefield2018 IEEE 18th International Conference on Bioinformatics and Bioengineering (BIBE), 29. Okt. 2018 - 31. Okt. 2018, Taichung, Taiwandeu
kops.date.conferenceEnd2018-10-31eng
kops.date.conferenceStart2018-10-29eng
kops.flag.knbibliographytrue
kops.location.conferenceTaichung, Taiwaneng
kops.sourcefield<i>2018 IEEE 18th International Conference on Bioinformatics and Bioengineering (BIBE) : Proceedings</i>. Piscataway, NJ: IEEE, 2018, pp. 163-169. eISSN 2471-7819. ISBN 978-1-5386-6217-5. Available under: doi: 10.1109/BIBE.2018.00039deu
kops.sourcefield.plain2018 IEEE 18th International Conference on Bioinformatics and Bioengineering (BIBE) : Proceedings. Piscataway, NJ: IEEE, 2018, pp. 163-169. eISSN 2471-7819. ISBN 978-1-5386-6217-5. Available under: doi: 10.1109/BIBE.2018.00039deu
kops.sourcefield.plain2018 IEEE 18th International Conference on Bioinformatics and Bioengineering (BIBE) : Proceedings. Piscataway, NJ: IEEE, 2018, pp. 163-169. eISSN 2471-7819. ISBN 978-1-5386-6217-5. Available under: doi: 10.1109/BIBE.2018.00039eng
kops.title.conference2018 IEEE 18th International Conference on Bioinformatics and Bioengineering (BIBE)eng
relation.isAuthorOfPublicationa53835fa-b2c6-42eb-b2c9-fe7ce4c8b1a2
relation.isAuthorOfPublicationf7d975ae-99fa-424d-941b-def4975b4a78
relation.isAuthorOfPublication732ac5c8-ab15-4a1b-8491-9ab101986439
relation.isAuthorOfPublication1c02b143-eb12-46d3-9539-68660ff48b52
relation.isAuthorOfPublication.latestForDiscoverya53835fa-b2c6-42eb-b2c9-fe7ce4c8b1a2
source.bibliographicInfo.fromPage163eng
source.bibliographicInfo.toPage169eng
source.identifier.eissn2471-7819eng
source.identifier.isbn978-1-5386-6217-5eng
source.publisherIEEEeng
source.publisher.locationPiscataway, NJeng
source.title2018 IEEE 18th International Conference on Bioinformatics and Bioengineering (BIBE) : Proceedingseng

Dateien