Shared behavioral mechanisms underlie C. elegans aggregation and swarming

dc.contributor.authorDing, Serena
dc.contributor.authorSchumacher, Linus J.
dc.contributor.authorJaver, Avelino E.
dc.contributor.authorEndres, Robert G.
dc.contributor.authorBrown, André E. X.
dc.date.accessioned2021-07-23T08:32:58Z
dc.date.available2021-07-23T08:32:58Z
dc.date.issued2019eng
dc.description.abstractIn complex biological systems, simple individual-level behavioral rules can give rise to emergent group-level behavior. While collective behavior has been well studied in cells and larger organisms, the mesoscopic scale is less understood, as it is unclear which sensory inputs and physical processes matter a priori. Here, we investigate collective feeding in the roundworm C. elegans at this intermediate scale, using quantitative phenotyping and agent-based modeling to identify behavioral rules underlying both aggregation and swarming-a dynamic phenotype only observed at longer timescales. Using fluorescence multi-worm tracking, we quantify aggregation in terms of individual dynamics and population-level statistics. Then we use agent-based simulations and approximate Bayesian inference to identify three key behavioral rules for aggregation: cluster-edge reversals, a density-dependent switch between crawling speeds, and taxis towards neighboring worms. Our simulations suggest that swarming is simply driven by local food depletion but otherwise employs the same behavioral mechanisms as the initial aggregation.eng
dc.description.versionpublishedeng
dc.identifier.doi10.7554/eLife.43318eng
dc.identifier.pmid31021320eng
dc.identifier.ppn1764223446
dc.identifier.urihttps://kops.uni-konstanz.de/handle/123456789/54401
dc.language.isoengeng
dc.rightsAttribution 4.0 International
dc.rights.urihttp://creativecommons.org/licenses/by/4.0/
dc.subject.ddc570eng
dc.titleShared behavioral mechanisms underlie C. elegans aggregation and swarmingeng
dc.typeJOURNAL_ARTICLEeng
dspace.entity.typePublication
kops.citation.bibtex
@article{Ding2019Share-54401,
  year={2019},
  doi={10.7554/eLife.43318},
  title={Shared behavioral mechanisms underlie C. elegans aggregation and swarming},
  volume={8},
  journal={eLife},
  author={Ding, Serena and Schumacher, Linus J. and Javer, Avelino E. and Endres, Robert G. and Brown, André E. X.},
  note={Article Number: e43318}
}
kops.citation.iso690DING, Serena, Linus J. SCHUMACHER, Avelino E. JAVER, Robert G. ENDRES, André E. X. BROWN, 2019. Shared behavioral mechanisms underlie C. elegans aggregation and swarming. In: eLife. eLife Sciences Publications. 2019, 8, e43318. eISSN 2050-084X. Available under: doi: 10.7554/eLife.43318deu
kops.citation.iso690DING, Serena, Linus J. SCHUMACHER, Avelino E. JAVER, Robert G. ENDRES, André E. X. BROWN, 2019. Shared behavioral mechanisms underlie C. elegans aggregation and swarming. In: eLife. eLife Sciences Publications. 2019, 8, e43318. eISSN 2050-084X. Available under: doi: 10.7554/eLife.43318eng
kops.citation.rdf
<rdf:RDF
    xmlns:dcterms="http://purl.org/dc/terms/"
    xmlns:dc="http://purl.org/dc/elements/1.1/"
    xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#"
    xmlns:bibo="http://purl.org/ontology/bibo/"
    xmlns:dspace="http://digital-repositories.org/ontologies/dspace/0.1.0#"
    xmlns:foaf="http://xmlns.com/foaf/0.1/"
    xmlns:void="http://rdfs.org/ns/void#"
    xmlns:xsd="http://www.w3.org/2001/XMLSchema#" > 
  <rdf:Description rdf:about="https://kops.uni-konstanz.de/server/rdf/resource/123456789/54401">
    <dc:creator>Schumacher, Linus J.</dc:creator>
    <dc:creator>Brown, André E. X.</dc:creator>
    <dc:contributor>Brown, André E. X.</dc:contributor>
    <dcterms:title>Shared behavioral mechanisms underlie C. elegans aggregation and swarming</dcterms:title>
    <dc:creator>Endres, Robert G.</dc:creator>
    <dc:contributor>Javer, Avelino E.</dc:contributor>
    <dc:date rdf:datatype="http://www.w3.org/2001/XMLSchema#dateTime">2021-07-23T08:32:58Z</dc:date>
    <dc:rights>Attribution 4.0 International</dc:rights>
    <dspace:hasBitstream rdf:resource="https://kops.uni-konstanz.de/bitstream/123456789/54401/3/Ding_2-xbncfopf3mwr8.pdf"/>
    <dc:creator>Ding, Serena</dc:creator>
    <dc:contributor>Ding, Serena</dc:contributor>
    <dcterms:isPartOf rdf:resource="https://kops.uni-konstanz.de/server/rdf/resource/123456789/28"/>
    <bibo:uri rdf:resource="https://kops.uni-konstanz.de/handle/123456789/54401"/>
    <dspace:isPartOfCollection rdf:resource="https://kops.uni-konstanz.de/server/rdf/resource/123456789/28"/>
    <foaf:homepage rdf:resource="http://localhost:8080/"/>
    <dc:contributor>Schumacher, Linus J.</dc:contributor>
    <dcterms:hasPart rdf:resource="https://kops.uni-konstanz.de/bitstream/123456789/54401/3/Ding_2-xbncfopf3mwr8.pdf"/>
    <dcterms:issued>2019</dcterms:issued>
    <dc:contributor>Endres, Robert G.</dc:contributor>
    <dcterms:rights rdf:resource="http://creativecommons.org/licenses/by/4.0/"/>
    <dc:language>eng</dc:language>
    <dc:creator>Javer, Avelino E.</dc:creator>
    <void:sparqlEndpoint rdf:resource="http://localhost/fuseki/dspace/sparql"/>
    <dcterms:available rdf:datatype="http://www.w3.org/2001/XMLSchema#dateTime">2021-07-23T08:32:58Z</dcterms:available>
    <dcterms:abstract xml:lang="eng">In complex biological systems, simple individual-level behavioral rules can give rise to emergent group-level behavior. While collective behavior has been well studied in cells and larger organisms, the mesoscopic scale is less understood, as it is unclear which sensory inputs and physical processes matter a priori. Here, we investigate collective feeding in the roundworm C. elegans at this intermediate scale, using quantitative phenotyping and agent-based modeling to identify behavioral rules underlying both aggregation and swarming-a dynamic phenotype only observed at longer timescales. Using fluorescence multi-worm tracking, we quantify aggregation in terms of individual dynamics and population-level statistics. Then we use agent-based simulations and approximate Bayesian inference to identify three key behavioral rules for aggregation: cluster-edge reversals, a density-dependent switch between crawling speeds, and taxis towards neighboring worms. Our simulations suggest that swarming is simply driven by local food depletion but otherwise employs the same behavioral mechanisms as the initial aggregation.</dcterms:abstract>
  </rdf:Description>
</rdf:RDF>
kops.description.openAccessopenaccessgoldeng
kops.flag.isPeerReviewedtrueeng
kops.identifier.nbnurn:nbn:de:bsz:352-2-xbncfopf3mwr8
kops.sourcefieldeLife. eLife Sciences Publications. 2019, <b>8</b>, e43318. eISSN 2050-084X. Available under: doi: 10.7554/eLife.43318deu
kops.sourcefield.plaineLife. eLife Sciences Publications. 2019, 8, e43318. eISSN 2050-084X. Available under: doi: 10.7554/eLife.43318deu
kops.sourcefield.plaineLife. eLife Sciences Publications. 2019, 8, e43318. eISSN 2050-084X. Available under: doi: 10.7554/eLife.43318eng
relation.isAuthorOfPublication505928a3-5aeb-40e5-80b8-59e91b807c77
relation.isAuthorOfPublication.latestForDiscovery505928a3-5aeb-40e5-80b8-59e91b807c77
source.bibliographicInfo.articleNumbere43318eng
source.bibliographicInfo.volume8eng
source.identifier.eissn2050-084Xeng
source.periodicalTitleeLifeeng
source.publishereLife Sciences Publicationseng

Dateien

Originalbündel

Gerade angezeigt 1 - 1 von 1
Vorschaubild nicht verfügbar
Name:
Ding_2-xbncfopf3mwr8.pdf
Größe:
4.8 MB
Format:
Adobe Portable Document Format
Beschreibung:
Ding_2-xbncfopf3mwr8.pdf
Ding_2-xbncfopf3mwr8.pdfGröße: 4.8 MBDownloads: 250

Lizenzbündel

Gerade angezeigt 1 - 1 von 1
Vorschaubild nicht verfügbar
Name:
license.txt
Größe:
3.96 KB
Format:
Item-specific license agreed upon to submission
Beschreibung:
license.txt
license.txtGröße: 3.96 KBDownloads: 0