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Registration to a Neuroanatomical Reference Atlas - Identifying Glomeruli in Optical Recordings of the Honeybee Brain

Registration to a Neuroanatomical Reference Atlas - Identifying Glomeruli in Optical Recordings of the Honeybee Brain

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STRAUCH, Martin, Cosmas Giovanni GALIZIA, 2008. Registration to a Neuroanatomical Reference Atlas - Identifying Glomeruli in Optical Recordings of the Honeybee Brain. GCB. Dresden, Germany, 9. Sep 2008 - 12. Sep 2008. In: BEYER, Andreas, ed. and others. German Conference on Bioinformatics : GCB 2008, 09. - 12.09.2008 in Dresden, Germany. GCB. Dresden, Germany, 9. Sep 2008 - 12. Sep 2008. Bonn:Ges. für Informatik, pp. 85-95

@inproceedings{Strauch2008Regis-8422, title={Registration to a Neuroanatomical Reference Atlas - Identifying Glomeruli in Optical Recordings of the Honeybee Brain}, year={2008}, number={136}, address={Bonn}, publisher={Ges. für Informatik}, series={GI-Edition, Proceedings}, booktitle={German Conference on Bioinformatics : GCB 2008, 09. - 12.09.2008 in Dresden, Germany}, pages={85--95}, editor={Beyer, Andreas}, author={Strauch, Martin and Galizia, Cosmas Giovanni} }

<rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bibo="http://purl.org/ontology/bibo/" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:xsd="http://www.w3.org/2001/XMLSchema#" > <rdf:Description rdf:about="https://kops.uni-konstanz.de/rdf/resource/123456789/8422"> <dcterms:title>Registration to a Neuroanatomical Reference Atlas - Identifying Glomeruli in Optical Recordings of the Honeybee Brain</dcterms:title> <dc:creator>Strauch, Martin</dc:creator> <dcterms:abstract xml:lang="eng">An odorant stimulus given to a bee elicits a characteristic combinatorial pattern of activity in neuronal units called glomeruli. These patterns can be measured by optical imaging, however detecting and identifying the glomeruli is a laborious task and prone to errors. Here, we present an image analysis pipeline for the automatic detection and identification of glomeruli. It involves Independent Component Analysis (ICA) to detect glomeruli in CCD camera data, a filtering step to exclude nonglomerulus objects and a graph-matching approach to find the best projection of the observed brain region onto a reference atlas. We evaluate our method against a manual glomerulus identification performed by a human expert and show that we achieve reliable results. Employing our method, we are now able to screen multiple recordings with the same accuracy, yielding a homogeneous collection of glomerulus identity mappings. These will subsequently be used to extract activity patterns that can be compared between individuals.</dcterms:abstract> <dc:contributor>Galizia, Cosmas Giovanni</dc:contributor> <dc:date rdf:datatype="http://www.w3.org/2001/XMLSchema#dateTime">2011-03-24T17:43:29Z</dc:date> <dcterms:rights rdf:resource="http://nbn-resolving.org/urn:nbn:de:bsz:352-20140905103416863-3868037-7"/> <dc:creator>Galizia, Cosmas Giovanni</dc:creator> <dc:language>eng</dc:language> <dc:format>application/pdf</dc:format> <dc:rights>deposit-license</dc:rights> <dcterms:available rdf:datatype="http://www.w3.org/2001/XMLSchema#dateTime">2011-03-24T17:43:29Z</dcterms:available> <dcterms:issued>2008</dcterms:issued> <dc:contributor>Strauch, Martin</dc:contributor> <dcterms:bibliographicCitation>Publ. in: German Conference on Bioinformatics : GCB 2008, 09. - 12.09.2008 in Dresden, Germany / Andreas Beyer ... (eds.). - Bonn : Ges. für Informatik, 2008, pp. 85-95. - (GI-Edition / Proceedings ; 136)</dcterms:bibliographicCitation> <bibo:uri rdf:resource="http://kops.uni-konstanz.de/handle/123456789/8422"/> </rdf:Description> </rdf:RDF>

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