KOPS - The Institutional Repository of the University of Konstanz

Construction of a variability map for eukaryotic large subunit ribosomal RNA

Construction of a variability map for eukaryotic large subunit ribosomal RNA

Cite This

Files in this item

Checksum: MD5:24a8e88f0618e52329d1a71e090cce8f

BEN ALI, Abdelghani, Jan WUYTS, Rupert de WACHTER, Axel MEYER, Yves van de PEER, 1999. Construction of a variability map for eukaryotic large subunit ribosomal RNA. In: Nucleic Acids Research. 27(14), pp. 2825-2831. eISSN 1362-4962. Available under: doi: 10.1093/nar/27.14.2825

@article{BenAli1999Const-7082, title={Construction of a variability map for eukaryotic large subunit ribosomal RNA}, year={1999}, doi={10.1093/nar/27.14.2825}, number={14}, volume={27}, journal={Nucleic Acids Research}, pages={2825--2831}, author={Ben Ali, Abdelghani and Wuyts, Jan and Wachter, Rupert de and Meyer, Axel and Peer, Yves van de} }

<rdf:RDF xmlns:dcterms="http://purl.org/dc/terms/" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bibo="http://purl.org/ontology/bibo/" xmlns:dspace="http://digital-repositories.org/ontologies/dspace/0.1.0#" xmlns:foaf="http://xmlns.com/foaf/0.1/" xmlns:void="http://rdfs.org/ns/void#" xmlns:xsd="http://www.w3.org/2001/XMLSchema#" > <rdf:Description rdf:about="https://kops.uni-konstanz.de/rdf/resource/123456789/7082"> <dcterms:title>Construction of a variability map for eukaryotic large subunit ribosomal RNA</dcterms:title> <dspace:isPartOfCollection rdf:resource="https://kops.uni-konstanz.de/rdf/resource/123456789/28"/> <dc:creator>Wachter, Rupert de</dc:creator> <dcterms:bibliographicCitation>First publ. in: Nucleic Acids Research 27 (1999), 14, pp. 2825 2831</dcterms:bibliographicCitation> <dcterms:abstract xml:lang="eng">In this paper, we present a variability map of the eukaryotic large subunit ribosomal RNA, showing the distribution of variable and conserved sites in this molecule. The variability of each site in this map is indicated by means of a colored dot. Construction of the variability map was based on the substitution rate calibration (SRC) method, in which the substitution rate of each nucleotide site is computed by looking at the frequency with which sequence pairs differ at that site as a function of their evolutionary distance. Variability maps constructed by this method provide a much more accurate and objective description of site-to-site variability than visual inspection of sequence alignments.</dcterms:abstract> <dcterms:available rdf:datatype="http://www.w3.org/2001/XMLSchema#dateTime">2011-03-24T17:31:21Z</dcterms:available> <dc:creator>Ben Ali, Abdelghani</dc:creator> <dc:date rdf:datatype="http://www.w3.org/2001/XMLSchema#dateTime">2011-03-24T17:31:21Z</dc:date> <dcterms:isPartOf rdf:resource="https://kops.uni-konstanz.de/rdf/resource/123456789/28"/> <dcterms:rights rdf:resource="http://creativecommons.org/licenses/by-nc-nd/2.0/"/> <dc:language>eng</dc:language> <dc:rights>Attribution-NonCommercial-NoDerivs 2.0 Generic</dc:rights> <dc:creator>Meyer, Axel</dc:creator> <bibo:uri rdf:resource="http://kops.uni-konstanz.de/handle/123456789/7082"/> <dc:creator>Peer, Yves van de</dc:creator> <dc:contributor>Wuyts, Jan</dc:contributor> <dc:contributor>Peer, Yves van de</dc:contributor> <dc:contributor>Meyer, Axel</dc:contributor> <dcterms:hasPart rdf:resource="https://kops.uni-konstanz.de/bitstream/123456789/7082/1/Construction_of_a_variability_map_1999.pdf"/> <dc:format>application/pdf</dc:format> <dspace:hasBitstream rdf:resource="https://kops.uni-konstanz.de/bitstream/123456789/7082/1/Construction_of_a_variability_map_1999.pdf"/> <foaf:homepage rdf:resource="http://localhost:8080/jspui"/> <dc:creator>Wuyts, Jan</dc:creator> <void:sparqlEndpoint rdf:resource="http://localhost/fuseki/dspace/sparql"/> <dc:contributor>Wachter, Rupert de</dc:contributor> <dc:contributor>Ben Ali, Abdelghani</dc:contributor> <dcterms:issued>1999</dcterms:issued> </rdf:Description> </rdf:RDF>

Downloads since Oct 1, 2014 (Information about access statistics)

Construction_of_a_variability_map_1999.pdf 413

This item appears in the following Collection(s)

Attribution-NonCommercial-NoDerivs 2.0 Generic Except where otherwise noted, this item's license is described as Attribution-NonCommercial-NoDerivs 2.0 Generic

Search KOPS


Browse

My Account