Aufgrund von Vorbereitungen auf eine neue Version von KOPS, können am Montag, 6.2. und Dienstag, 7.2. keine Publikationen eingereicht werden. (Due to preparations for a new version of KOPS, no publications can be submitted on Monday, Feb. 6 and Tuesday, Feb. 7.)

Reefgenomics.Org : a repository for marine genomics data

Cite This

Files in this item

Checksum: MD5:00cab023d7cdd0604a210546653718d9

LIEW, Yi Jin, Manuel ARANDA, Christian R. VOOLSTRA, 2016. Reefgenomics.Org : a repository for marine genomics data. In: Database : the journal of biological databases and curation. Oxford University Press. 2016, baw152. eISSN 1758-0463. Available under: doi: 10.1093/database/baw152

@article{Liew2016Reefg-51148, title={Reefgenomics.Org : a repository for marine genomics data}, year={2016}, doi={10.1093/database/baw152}, volume={2016}, journal={Database : the journal of biological databases and curation}, author={Liew, Yi Jin and Aranda, Manuel and Voolstra, Christian R.}, note={Article Number: baw152} }

Voolstra, Christian R. 2016 Liew, Yi Jin Aranda, Manuel 2020-10-01T07:42:34Z Reefgenomics.Org : a repository for marine genomics data Aranda, Manuel Liew, Yi Jin Voolstra, Christian R. Attribution 4.0 International eng Over the last decade, technological advancements have substantially decreased the cost and time of obtaining large amounts of sequencing data. Paired with the exponentially increased computing power, individual labs are now able to sequence genomes or transcriptomes to investigate biological questions of interest. This has led to a significant increase in available sequence data. Although the bulk of data published in articles are stored in public sequence databases, very often, only raw sequencing data are available; miscellaneous data such as assembled transcriptomes, genome annotations etc. are not easily obtainable through the same means. Here, we introduce our website (http://reefgenomics.org) that aims to centralize genomic and transcriptomic data from marine organisms. Besides providing convenient means to download sequences, we provide (where applicable) a genome browser to explore available genomic features, and a BLAST interface to search through the hosted sequences. Through the interface, multiple datasets can be queried simultaneously, allowing for the retrieval of matching sequences from organisms of interest. The minimalistic, no-frills interface reduces visual clutter, making it convenient for end-users to search and explore processed sequence data.<br />DATABASE URL: http://reefgenomics.org. 2020-10-01T07:42:34Z

Downloads since Oct 1, 2020 (Information about access statistics)

Liew_2-10wn0xdtx1uu52.pdf 239

This item appears in the following Collection(s)

Attribution 4.0 International Except where otherwise noted, this item's license is described as Attribution 4.0 International

Search KOPS


Browse

My Account