Hologenome analysis of two marine sponges with different microbiomes

Type of Publication: Journal article
Publication status: Published
URI (citable link): http://nbn-resolving.de/urn:nbn:de:bsz:352-2-hmx9j75dpgpw8
Author: Ryu, Taewoo; Seridi, Loqmane; Moitinho-Silva, Lucas; Oates, Matthew; Liew, Yi Jin; Mavromatis, Charalampos; Wang, Xiaolei; Haywood, Annika; Voolstra, Christian R.; Ravasi, Timothy et al.
Year of publication: 2016
Published in: BMC genomics ; 17 (2016). - 158. - BioMed Central. - eISSN 1471-2164
Pubmed ID: 26926518
DOI (citable link): https://dx.doi.org/10.1186/s12864-016-2501-0
Summary:
Background:
Sponges (Porifera) harbor distinct microbial consortia within their mesohyl interior. We herein analysed the hologenomes of Stylissa carteri and Xestospongia testudinaria, which notably differ in their microbiome content.

Results:
Our analysis revealed that S. carteri has an expanded repertoire of immunological domains, specifically Scavenger Receptor Cysteine-Rich (SRCR)-like domains, compared to X. testudinaria. On the microbial side, metatranscriptome analyses revealed an overrepresentation of potential symbiosis-related domains in X. testudinaria.

Conclusions:
Our findings provide genomic insights into the molecular mechanisms underlying host-symbiont coevolution and may serve as a roadmap for future hologenome analyses.
Subject (DDC): 570 Biosciences, Biology
Keywords: Sponge, Stylissa carteri, Xestospongia testudinaria, Innate immune system, Host, Microbial symbionts, Hologenome
Link to License: In Copyright
Refereed: Yes

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RYU, Taewoo, Loqmane SERIDI, Lucas MOITINHO-SILVA, Matthew OATES, Yi Jin LIEW, Charalampos MAVROMATIS, Xiaolei WANG, Annika HAYWOOD, Christian R. VOOLSTRA, Timothy RAVASI, 2016. Hologenome analysis of two marine sponges with different microbiomes. In: BMC genomics. BioMed Central. 17, 158. eISSN 1471-2164. Available under: doi: 10.1186/s12864-016-2501-0

@article{Ryu2016-02-29Holog-51048, title={Hologenome analysis of two marine sponges with different microbiomes}, year={2016}, doi={10.1186/s12864-016-2501-0}, volume={17}, journal={BMC genomics}, author={Ryu, Taewoo and Seridi, Loqmane and Moitinho-Silva, Lucas and Oates, Matthew and Liew, Yi Jin and Mavromatis, Charalampos and Wang, Xiaolei and Haywood, Annika and Voolstra, Christian R. and Ravasi, Timothy}, note={Article Number: 158} }

Voolstra, Christian R. eng Ryu, Taewoo 2020-09-28T08:29:25Z Ravasi, Timothy Voolstra, Christian R. Liew, Yi Jin Moitinho-Silva, Lucas Moitinho-Silva, Lucas Mavromatis, Charalampos Mavromatis, Charalampos Oates, Matthew Wang, Xiaolei Haywood, Annika Ryu, Taewoo 2016-02-29 Haywood, Annika Background:<br />Sponges (Porifera) harbor distinct microbial consortia within their mesohyl interior. We herein analysed the hologenomes of Stylissa carteri and Xestospongia testudinaria, which notably differ in their microbiome content.<br /><br />Results:<br />Our analysis revealed that S. carteri has an expanded repertoire of immunological domains, specifically Scavenger Receptor Cysteine-Rich (SRCR)-like domains, compared to X. testudinaria. On the microbial side, metatranscriptome analyses revealed an overrepresentation of potential symbiosis-related domains in X. testudinaria.<br /><br />Conclusions:<br />Our findings provide genomic insights into the molecular mechanisms underlying host-symbiont coevolution and may serve as a roadmap for future hologenome analyses. Seridi, Loqmane Wang, Xiaolei Ravasi, Timothy Seridi, Loqmane 2020-09-28T08:29:25Z terms-of-use Oates, Matthew Liew, Yi Jin Hologenome analysis of two marine sponges with different microbiomes

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