Hologenome analysis of two marine sponges with different microbiomes
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| Type of Publication: | Journal article |
| Publication status: | Published |
| URI (citable link): | http://nbn-resolving.de/urn:nbn:de:bsz:352-2-hmx9j75dpgpw8 |
| Author: | Ryu, Taewoo; Seridi, Loqmane; Moitinho-Silva, Lucas; Oates, Matthew; Liew, Yi Jin; Mavromatis, Charalampos; Wang, Xiaolei; Haywood, Annika; Voolstra, Christian R.; Ravasi, Timothy et al. |
| Year of publication: | 2016 |
| Published in: | BMC genomics ; 17 (2016). - 158. - BioMed Central. - eISSN 1471-2164 |
| Pubmed ID: | 26926518 |
| DOI (citable link): | https://dx.doi.org/10.1186/s12864-016-2501-0 |
| Summary: |
Background:
Sponges (Porifera) harbor distinct microbial consortia within their mesohyl interior. We herein analysed the hologenomes of Stylissa carteri and Xestospongia testudinaria, which notably differ in their microbiome content. Results: Our analysis revealed that S. carteri has an expanded repertoire of immunological domains, specifically Scavenger Receptor Cysteine-Rich (SRCR)-like domains, compared to X. testudinaria. On the microbial side, metatranscriptome analyses revealed an overrepresentation of potential symbiosis-related domains in X. testudinaria. Conclusions: Our findings provide genomic insights into the molecular mechanisms underlying host-symbiont coevolution and may serve as a roadmap for future hologenome analyses. |
| Subject (DDC): | 570 Biosciences, Biology |
| Keywords: | Sponge, Stylissa carteri, Xestospongia testudinaria, Innate immune system, Host, Microbial symbionts, Hologenome |
| Link to License: | Attribution 4.0 International |
| Refereed: | Yes |
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RYU, Taewoo, Loqmane SERIDI, Lucas MOITINHO-SILVA, Matthew OATES, Yi Jin LIEW, Charalampos MAVROMATIS, Xiaolei WANG, Annika HAYWOOD, Christian R. VOOLSTRA, Timothy RAVASI, 2016. Hologenome analysis of two marine sponges with different microbiomes. In: BMC genomics. BioMed Central. 17, 158. eISSN 1471-2164. Available under: doi: 10.1186/s12864-016-2501-0
@article{Ryu2016-02-29Holog-51048, title={Hologenome analysis of two marine sponges with different microbiomes}, year={2016}, doi={10.1186/s12864-016-2501-0}, volume={17}, journal={BMC genomics}, author={Ryu, Taewoo and Seridi, Loqmane and Moitinho-Silva, Lucas and Oates, Matthew and Liew, Yi Jin and Mavromatis, Charalampos and Wang, Xiaolei and Haywood, Annika and Voolstra, Christian R. and Ravasi, Timothy}, note={Article Number: 158} }
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