Publikation:

Hologenome analysis of two marine sponges with different microbiomes

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Ryu_2-hmx9j75dpgpw8.pdf
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Datum

2016

Autor:innen

Ryu, Taewoo
Seridi, Loqmane
Moitinho-Silva, Lucas
Oates, Matthew
Liew, Yi Jin
Mavromatis, Charalampos
Wang, Xiaolei
Haywood, Annika
Ravasi, Timothy
et al.

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URI (zitierfähiger Link)
http://nbn-resolving.de/urn:nbn:de:bsz:352-2-hmx9j75dpgpw8
DOI (zitierfähiger Link)
https://doi.org/10.1186/s12864-016-2501-0
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CC BY 4.0

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Open Access-Veröffentlichung
Open Access Gold

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Biologie: Publikationen
Core Facility der Universität Konstanz

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Published

Erschienen in

BMC genomics. BioMed Central. 2016, 17, 158. eISSN 1471-2164. Available under: doi: 10.1186/s12864-016-2501-0

Zusammenfassung

Background:
Sponges (Porifera) harbor distinct microbial consortia within their mesohyl interior. We herein analysed the hologenomes of Stylissa carteri and Xestospongia testudinaria, which notably differ in their microbiome content.

Results:
Our analysis revealed that S. carteri has an expanded repertoire of immunological domains, specifically Scavenger Receptor Cysteine-Rich (SRCR)-like domains, compared to X. testudinaria. On the microbial side, metatranscriptome analyses revealed an overrepresentation of potential symbiosis-related domains in X. testudinaria.

Conclusions:
Our findings provide genomic insights into the molecular mechanisms underlying host-symbiont coevolution and may serve as a roadmap for future hologenome analyses.

Zusammenfassung in einer weiteren Sprache

Fachgebiet (DDC)
570 Biowissenschaften, Biologie

Schlagwörter

Sponge, Stylissa carteri, Xestospongia testudinaria, Innate immune system, Host, Microbial symbionts, Hologenome

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ISO 690RYU, Taewoo, Loqmane SERIDI, Lucas MOITINHO-SILVA, Matthew OATES, Yi Jin LIEW, Charalampos MAVROMATIS, Xiaolei WANG, Annika HAYWOOD, Christian R. VOOLSTRA, Timothy RAVASI, 2016. Hologenome analysis of two marine sponges with different microbiomes. In: BMC genomics. BioMed Central. 2016, 17, 158. eISSN 1471-2164. Available under: doi: 10.1186/s12864-016-2501-0
BibTex
@article{Ryu2016-02-29Holog-51048,
  year={2016},
  doi={10.1186/s12864-016-2501-0},
  title={Hologenome analysis of two marine sponges with different microbiomes},
  volume={17},
  journal={BMC genomics},
  author={Ryu, Taewoo and Seridi, Loqmane and Moitinho-Silva, Lucas and Oates, Matthew and Liew, Yi Jin and Mavromatis, Charalampos and Wang, Xiaolei and Haywood, Annika and Voolstra, Christian R. and Ravasi, Timothy},
  note={Article Number: 158}
}
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