Hologenome analysis of two marine sponges with different microbiomes

Ryu, Taewoo; Seridi, Loqmane; Moitinho-Silva, Lucas; Oates, Matthew; Liew, Yi Jin; Mavromatis, Charalampos; Wang, Xiaolei; Haywood, Annika; Voolstra, Christian R.; Ravasi, Timothy

Hologenome analysis of two marine sponges with different microbiomes

Dateien

Ryu_2-hmx9j75dpgpw8.pdfGröße: 3.79 MBDownloads: 373

Datum

2016

Autor:innen

Ryu, Taewoo

Seridi, Loqmane

Moitinho-Silva, Lucas

Oates, Matthew

Liew, Yi Jin

Mavromatis, Charalampos

Wang, Xiaolei

Haywood, Annika

Voolstra, Christian R.

Ravasi, Timothy

et al.

Open Access-Veröffentlichung

Open Access Gold

Sammlungen

Biologie

Publikationstyp

Zeitschriftenartikel

Publikationsstatus

Published

Erschienen in

BMC genomics. BioMed Central. 2016, 17, 158. eISSN 1471-2164. Available under: doi: 10.1186/s12864-016-2501-0

Zusammenfassung

Background:
Sponges (Porifera) harbor distinct microbial consortia within their mesohyl interior. We herein analysed the hologenomes of Stylissa carteri and Xestospongia testudinaria, which notably differ in their microbiome content.

Results:
Our analysis revealed that S. carteri has an expanded repertoire of immunological domains, specifically Scavenger Receptor Cysteine-Rich (SRCR)-like domains, compared to X. testudinaria. On the microbial side, metatranscriptome analyses revealed an overrepresentation of potential symbiosis-related domains in X. testudinaria.

Conclusions:
Our findings provide genomic insights into the molecular mechanisms underlying host-symbiont coevolution and may serve as a roadmap for future hologenome analyses.

Fachgebiet (DDC)

570 Biowissenschaften, Biologie

Schlagwörter

Sponge, Stylissa carteri, Xestospongia testudinaria, Innate immune system, Host, Microbial symbionts, Hologenome

Zitieren

ISO 690

RYU, Taewoo, Loqmane SERIDI, Lucas MOITINHO-SILVA, Matthew OATES, Yi Jin LIEW, Charalampos MAVROMATIS, Xiaolei WANG, Annika HAYWOOD, Christian R. VOOLSTRA, Timothy RAVASI, 2016. Hologenome analysis of two marine sponges with different microbiomes. In: BMC genomics. BioMed Central. 2016, 17, 158. eISSN 1471-2164. Available under: doi: 10.1186/s12864-016-2501-0

BibTex

@article{Ryu2016-02-29Holog-51048,
  year={2016},
  doi={10.1186/s12864-016-2501-0},
  title={Hologenome analysis of two marine sponges with different microbiomes},
  volume={17},
  journal={BMC genomics},
  author={Ryu, Taewoo and Seridi, Loqmane and Moitinho-Silva, Lucas and Oates, Matthew and Liew, Yi Jin and Mavromatis, Charalampos and Wang, Xiaolei and Haywood, Annika and Voolstra, Christian R. and Ravasi, Timothy},
  note={Article Number: 158}
}

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