Publikation:

Hologenome analysis of two marine sponges with different microbiomes

Vorschaubild

Dateien

Ryu_2-hmx9j75dpgpw8.pdf
Ryu_2-hmx9j75dpgpw8.pdfGröße: 3.79 MBDownloads: 390

Datum

2016

Autor:innen

Ryu, Taewoo
Seridi, Loqmane
Moitinho-Silva, Lucas
Oates, Matthew
Liew, Yi Jin
Mavromatis, Charalampos
Wang, Xiaolei
Haywood, Annika
Ravasi, Timothy
et al.

Herausgeber:innen

Kontakt

ISSN der Zeitschrift

Electronic ISSN

ISBN

Bibliografische Daten

Verlag

Schriftenreihe

Auflagebezeichnung

URI (zitierfähiger Link)
http://nbn-resolving.de/urn:nbn:de:bsz:352-2-hmx9j75dpgpw8
DOI (zitierfähiger Link)
https://doi.org/10.1186/s12864-016-2501-0
ArXiv-ID

Internationale Patentnummer

Link zur Lizenz

CC BY 4.0

Angaben zur Forschungsförderung

Projekt

Open Access-Veröffentlichung
Open Access Gold

Sammlungen

Biologie: Publikationen
Core Facility der Universität Konstanz

Gesperrt bis

Titel in einer weiteren Sprache

Publikationstyp
Zeitschriftenartikel
Publikationsstatus
Published

Erschienen in

BMC genomics. BioMed Central. 2016, 17, 158. eISSN 1471-2164. Available under: doi: 10.1186/s12864-016-2501-0

Zusammenfassung

Background:
Sponges (Porifera) harbor distinct microbial consortia within their mesohyl interior. We herein analysed the hologenomes of Stylissa carteri and Xestospongia testudinaria, which notably differ in their microbiome content.

Results:
Our analysis revealed that S. carteri has an expanded repertoire of immunological domains, specifically Scavenger Receptor Cysteine-Rich (SRCR)-like domains, compared to X. testudinaria. On the microbial side, metatranscriptome analyses revealed an overrepresentation of potential symbiosis-related domains in X. testudinaria.

Conclusions:
Our findings provide genomic insights into the molecular mechanisms underlying host-symbiont coevolution and may serve as a roadmap for future hologenome analyses.

Zusammenfassung in einer weiteren Sprache

Fachgebiet (DDC)
570 Biowissenschaften, Biologie

Schlagwörter

Sponge, Stylissa carteri, Xestospongia testudinaria, Innate immune system, Host, Microbial symbionts, Hologenome

Konferenz

Rezension
undefined / . - undefined, undefined

Forschungsvorhaben

Organisationseinheiten

Zeitschriftenheft

Zugehörige Datensätze in KOPS

Zitieren

ISO 690RYU, Taewoo, Loqmane SERIDI, Lucas MOITINHO-SILVA, Matthew OATES, Yi Jin LIEW, Charalampos MAVROMATIS, Xiaolei WANG, Annika HAYWOOD, Christian R. VOOLSTRA, Timothy RAVASI, 2016. Hologenome analysis of two marine sponges with different microbiomes. In: BMC genomics. BioMed Central. 2016, 17, 158. eISSN 1471-2164. Available under: doi: 10.1186/s12864-016-2501-0
BibTex
@article{Ryu2016-02-29Holog-51048,
  year={2016},
  doi={10.1186/s12864-016-2501-0},
  title={Hologenome analysis of two marine sponges with different microbiomes},
  volume={17},
  journal={BMC genomics},
  author={Ryu, Taewoo and Seridi, Loqmane and Moitinho-Silva, Lucas and Oates, Matthew and Liew, Yi Jin and Mavromatis, Charalampos and Wang, Xiaolei and Haywood, Annika and Voolstra, Christian R. and Ravasi, Timothy},
  note={Article Number: 158}
}
RDF
<rdf:RDF
    xmlns:dcterms="http://purl.org/dc/terms/"
    xmlns:dc="http://purl.org/dc/elements/1.1/"
    xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#"
    xmlns:bibo="http://purl.org/ontology/bibo/"
    xmlns:dspace="http://digital-repositories.org/ontologies/dspace/0.1.0#"
    xmlns:foaf="http://xmlns.com/foaf/0.1/"
    xmlns:void="http://rdfs.org/ns/void#"
    xmlns:xsd="http://www.w3.org/2001/XMLSchema#" > 
  <rdf:Description rdf:about="https://kops.uni-konstanz.de/server/rdf/resource/123456789/51048">
    <bibo:uri rdf:resource="https://kops.uni-konstanz.de/handle/123456789/51048"/>
    <dc:creator>Ryu, Taewoo</dc:creator>
    <dspace:hasBitstream rdf:resource="https://kops.uni-konstanz.de/bitstream/123456789/51048/3/Ryu_2-hmx9j75dpgpw8.pdf"/>
    <dc:contributor>Ryu, Taewoo</dc:contributor>
    <foaf:homepage rdf:resource="http://localhost:8080/"/>
    <dc:contributor>Seridi, Loqmane</dc:contributor>
    <dc:creator>Voolstra, Christian R.</dc:creator>
    <dcterms:hasPart rdf:resource="https://kops.uni-konstanz.de/bitstream/123456789/51048/3/Ryu_2-hmx9j75dpgpw8.pdf"/>
    <dc:contributor>Liew, Yi Jin</dc:contributor>
    <dc:contributor>Moitinho-Silva, Lucas</dc:contributor>
    <dspace:isPartOfCollection rdf:resource="https://kops.uni-konstanz.de/server/rdf/resource/123456789/28"/>
    <dc:contributor>Voolstra, Christian R.</dc:contributor>
    <dc:creator>Moitinho-Silva, Lucas</dc:creator>
    <dc:contributor>Ravasi, Timothy</dc:contributor>
    <dc:creator>Liew, Yi Jin</dc:creator>
    <dc:date rdf:datatype="http://www.w3.org/2001/XMLSchema#dateTime">2020-09-28T08:29:25Z</dc:date>
    <void:sparqlEndpoint rdf:resource="http://localhost/fuseki/dspace/sparql"/>
    <dc:contributor>Oates, Matthew</dc:contributor>
    <dcterms:abstract xml:lang="eng">Background:&lt;br /&gt;Sponges (Porifera) harbor distinct microbial consortia within their mesohyl interior. We herein analysed the hologenomes of Stylissa carteri and Xestospongia testudinaria, which notably differ in their microbiome content.&lt;br /&gt;&lt;br /&gt;Results:&lt;br /&gt;Our analysis revealed that S. carteri has an expanded repertoire of immunological domains, specifically Scavenger Receptor Cysteine-Rich (SRCR)-like domains, compared to X. testudinaria. On the microbial side, metatranscriptome analyses revealed an overrepresentation of potential symbiosis-related domains in X. testudinaria.&lt;br /&gt;&lt;br /&gt;Conclusions:&lt;br /&gt;Our findings provide genomic insights into the molecular mechanisms underlying host-symbiont coevolution and may serve as a roadmap for future hologenome analyses.</dcterms:abstract>
    <dcterms:title>Hologenome analysis of two marine sponges with different microbiomes</dcterms:title>
    <dc:contributor>Wang, Xiaolei</dc:contributor>
    <dc:rights>Attribution 4.0 International</dc:rights>
    <dcterms:rights rdf:resource="http://creativecommons.org/licenses/by/4.0/"/>
    <dc:creator>Seridi, Loqmane</dc:creator>
    <dc:creator>Haywood, Annika</dc:creator>
    <dcterms:issued>2016-02-29</dcterms:issued>
    <dc:creator>Oates, Matthew</dc:creator>
    <dcterms:available rdf:datatype="http://www.w3.org/2001/XMLSchema#dateTime">2020-09-28T08:29:25Z</dcterms:available>
    <dc:creator>Mavromatis, Charalampos</dc:creator>
    <dc:contributor>Mavromatis, Charalampos</dc:contributor>
    <dc:creator>Wang, Xiaolei</dc:creator>
    <dc:contributor>Haywood, Annika</dc:contributor>
    <dc:creator>Ravasi, Timothy</dc:creator>
    <dcterms:isPartOf rdf:resource="https://kops.uni-konstanz.de/server/rdf/resource/123456789/28"/>
    <dc:language>eng</dc:language>
  </rdf:Description>
</rdf:RDF>

Interner Vermerk

xmlui.Submission.submit.DescribeStep.inputForms.label.kops_note_fromSubmitter

Kontakt
URL der Originalveröffentl.

Prüfdatum der URL

Prüfungsdatum der Dissertation

Finanzierungsart

Kommentar zur Publikation

Allianzlizenz
Corresponding Authors der Uni Konstanz vorhanden
Internationale Co-Autor:innen
Universitätsbibliographie
Nein
Begutachtet
Ja
Diese Publikation teilen