Extending KNIME for next-generation sequencing data analysis

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2011
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Jagla, Bernd
Coppée, Jean-Yves
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Bioinformatics. 2011, 27(20), pp. 2907-2909. ISSN 1367-4803. eISSN 1460-2059. Available under: doi: 10.1093/bioinformatics/btr478
Zusammenfassung

Summary: KNIME (Konstanz Information Miner) is a user-friendly and comprehensive open-source data integration, processing, analysis and exploration platform. We present here new functionality and workflows that open the door to performing next-generation sequencing analysis using the KNIME framework.

Availability: All sources and compiled code are available via the KNIME update mechanism. Example workflows and descriptions are available through http://tech.knime.org/community/next-generation-sequencing.

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ISO 690JAGLA, Bernd, Bernd WISWEDEL, Jean-Yves COPPÉE, 2011. Extending KNIME for next-generation sequencing data analysis. In: Bioinformatics. 2011, 27(20), pp. 2907-2909. ISSN 1367-4803. eISSN 1460-2059. Available under: doi: 10.1093/bioinformatics/btr478
BibTex
@article{Jagla2011-10-15Exten-37824,
  year={2011},
  doi={10.1093/bioinformatics/btr478},
  title={Extending KNIME for next-generation sequencing data analysis},
  number={20},
  volume={27},
  issn={1367-4803},
  journal={Bioinformatics},
  pages={2907--2909},
  author={Jagla, Bernd and Wiswedel, Bernd and Coppée, Jean-Yves}
}
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