Publikation:

Software support for SBGN maps : SBGN-ML and LibSBGN

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Van-Iersel_0-396367.pdf
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Datum

2012

Autor:innen

van Iersel, Martijn P.
Villeger, Alice C.
Czauderna, Tobias
Boyd, Sarah E.
Bergmann, Frank T.
Luna, Augustin
Demir, Emek
Sorokin, Anatoly
Dogrusoz, Ugur
et al.

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http://nbn-resolving.de/urn:nbn:de:bsz:352-0-396367
DOI (zitierfähiger Link)
https://doi.org/10.1093/bioinformatics/bts270
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Attribution-NonCommercial 3.0 Unported

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Published

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Bioinformatics. 2012, 28(15), pp. 2016-2021. ISSN 1367-4803. eISSN 1460-2059. Available under: doi: 10.1093/bioinformatics/bts270

Zusammenfassung

LibSBGN is a software library for reading, writing and manipulating Systems Biology Graphical Notation (SBGN) maps stored using the recently developed SBGN-ML file format. The library (available in C++ and Java) makes it easy for developers to add SBGN support to their tools, whereas the file format facilitates the exchange of maps between compatible software applications. The library also supports validation of maps, which simplifies the task of ensuring compliance with the detailed SBGN specifications. With this effort we hope to increase the adoption of SBGN in bioinformatics tools, ultimately enabling more researchers to visualize biological knowledge in a precise and unambiguous manner.

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ISO 690VAN IERSEL, Martijn P., Alice C. VILLEGER, Tobias CZAUDERNA, Sarah E. BOYD, Frank T. BERGMANN, Augustin LUNA, Emek DEMIR, Anatoly SOROKIN, Ugur DOGRUSOZ, Falk SCHREIBER, 2012. Software support for SBGN maps : SBGN-ML and LibSBGN. In: Bioinformatics. 2012, 28(15), pp. 2016-2021. ISSN 1367-4803. eISSN 1460-2059. Available under: doi: 10.1093/bioinformatics/bts270
BibTex
@article{vanIersel2012-08-01Softw-38524,
  year={2012},
  doi={10.1093/bioinformatics/bts270},
  title={Software support for SBGN maps : SBGN-ML and LibSBGN},
  number={15},
  volume={28},
  issn={1367-4803},
  journal={Bioinformatics},
  pages={2016--2021},
  author={van Iersel, Martijn P. and Villeger, Alice C. and Czauderna, Tobias and Boyd, Sarah E. and Bergmann, Frank T. and Luna, Augustin and Demir, Emek and Sorokin, Anatoly and Dogrusoz, Ugur and Schreiber, Falk}
}
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Interner Vermerk

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