Detection and phylogenetic assessment of conserved synteny derived from whole genome duplications

dc.contributor.authorKuraku, Shigehiro
dc.contributor.authorMeyer, Axel
dc.date.accessioned2012-11-28T09:39:20Zdeu
dc.date.available2013-10-14T22:25:03Zdeu
dc.date.issued2012
dc.description.abstractIdentification of intragenomic conservation of gene compositions in multiple chromosomal segments led to evidence of whole genome (WGDs) duplications. The process by which WGDs have been maintained and decayed provides us with clues for understanding how the genome evolves. In this chapter, we summarize current understanding of phylogenetic distribution and evolutionary impact of WGDs, introduce basic procedures to detect conserved synteny, and discuss typical pitfalls, as well as biological insights.eng
dc.description.versionpublished
dc.identifier.citationEvolutionary Genomics : Statistical and Computational Methods, 1 / Maria Anisimova [ed.]. - Totowa, NJ : Humana Press, 2012. - S. 385-395. - (Methods in Molecular Biology ; 855). - ISBN 978-1-61779-581-7deu
dc.identifier.doi10.1007/978-1-61779-582-4_14deu
dc.identifier.pmid22407717
dc.identifier.ppn37624030Xdeu
dc.identifier.urihttp://kops.uni-konstanz.de/handle/123456789/20904
dc.language.isoengdeu
dc.legacy.dateIssued2012-11-28deu
dc.rightsterms-of-usedeu
dc.rights.urihttps://rightsstatements.org/page/InC/1.0/deu
dc.subjectWhole genome duplicationeng
dc.subjectconserved syntenyeng
dc.subjectchromosome rearrangementeng
dc.subjectdifferential gene losseng
dc.subjecthidden paralogydeu
dc.subject.ddc570deu
dc.titleDetection and phylogenetic assessment of conserved synteny derived from whole genome duplicationseng
dc.typeINCOLLECTIONdeu
dspace.entity.typePublication
kops.citation.bibtex
@incollection{Kuraku2012Detec-20904,
  year={2012},
  doi={10.1007/978-1-61779-582-4_14},
  title={Detection and phylogenetic assessment of conserved synteny derived from whole genome duplications},
  number={855},
  isbn={978-1-61779-581-7},
  publisher={Humana Press},
  address={Totowa, NJ},
  series={Methods in Molecular Biology},
  booktitle={Evolutionary Genomics},
  pages={385--395},
  editor={Anisimova, Maria},
  author={Kuraku, Shigehiro and Meyer, Axel}
}
kops.citation.iso690KURAKU, Shigehiro, Axel MEYER, 2012. Detection and phylogenetic assessment of conserved synteny derived from whole genome duplications. In: ANISIMOVA, Maria, ed.. Evolutionary Genomics. Totowa, NJ: Humana Press, 2012, pp. 385-395. Methods in Molecular Biology. 855. ISBN 978-1-61779-581-7. Available under: doi: 10.1007/978-1-61779-582-4_14deu
kops.citation.iso690KURAKU, Shigehiro, Axel MEYER, 2012. Detection and phylogenetic assessment of conserved synteny derived from whole genome duplications. In: ANISIMOVA, Maria, ed.. Evolutionary Genomics. Totowa, NJ: Humana Press, 2012, pp. 385-395. Methods in Molecular Biology. 855. ISBN 978-1-61779-581-7. Available under: doi: 10.1007/978-1-61779-582-4_14eng
kops.citation.rdf
<rdf:RDF
    xmlns:dcterms="http://purl.org/dc/terms/"
    xmlns:dc="http://purl.org/dc/elements/1.1/"
    xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#"
    xmlns:bibo="http://purl.org/ontology/bibo/"
    xmlns:dspace="http://digital-repositories.org/ontologies/dspace/0.1.0#"
    xmlns:foaf="http://xmlns.com/foaf/0.1/"
    xmlns:void="http://rdfs.org/ns/void#"
    xmlns:xsd="http://www.w3.org/2001/XMLSchema#" > 
  <rdf:Description rdf:about="https://kops.uni-konstanz.de/server/rdf/resource/123456789/20904">
    <dcterms:rights rdf:resource="https://rightsstatements.org/page/InC/1.0/"/>
    <dc:contributor>Kuraku, Shigehiro</dc:contributor>
    <dcterms:isPartOf rdf:resource="https://kops.uni-konstanz.de/server/rdf/resource/123456789/28"/>
    <foaf:homepage rdf:resource="http://localhost:8080/"/>
    <dc:rights>terms-of-use</dc:rights>
    <void:sparqlEndpoint rdf:resource="http://localhost/fuseki/dspace/sparql"/>
    <dc:date rdf:datatype="http://www.w3.org/2001/XMLSchema#dateTime">2012-11-28T09:39:20Z</dc:date>
    <dcterms:issued>2012</dcterms:issued>
    <dc:creator>Meyer, Axel</dc:creator>
    <dcterms:hasPart rdf:resource="https://kops.uni-konstanz.de/bitstream/123456789/20904/2/Meyer_209040.pdf"/>
    <dcterms:bibliographicCitation>Evolutionary Genomics : Statistical and Computational Methods, 1 / Maria Anisimova [ed.]. - Totowa, NJ : Humana Press, 2012. - S. 385-395. - (Methods in Molecular Biology ; 855). - ISBN 978-1-61779-581-7</dcterms:bibliographicCitation>
    <dcterms:abstract xml:lang="eng">Identification of intragenomic conservation of gene compositions in multiple chromosomal segments led to evidence of whole genome (WGDs) duplications. The process by which WGDs have been maintained and decayed provides us with clues for understanding how the genome evolves. In this chapter, we summarize current understanding of phylogenetic distribution and evolutionary impact of WGDs, introduce basic procedures to detect conserved synteny, and discuss typical pitfalls, as well as biological insights.</dcterms:abstract>
    <bibo:uri rdf:resource="http://kops.uni-konstanz.de/handle/123456789/20904"/>
    <dspace:isPartOfCollection rdf:resource="https://kops.uni-konstanz.de/server/rdf/resource/123456789/28"/>
    <dc:creator>Kuraku, Shigehiro</dc:creator>
    <dc:language>eng</dc:language>
    <dcterms:title>Detection and phylogenetic assessment of conserved synteny derived from whole genome duplications</dcterms:title>
    <dspace:hasBitstream rdf:resource="https://kops.uni-konstanz.de/bitstream/123456789/20904/2/Meyer_209040.pdf"/>
    <dcterms:available rdf:datatype="http://www.w3.org/2001/XMLSchema#dateTime">2013-10-14T22:25:03Z</dcterms:available>
    <dc:contributor>Meyer, Axel</dc:contributor>
  </rdf:Description>
</rdf:RDF>
kops.description.openAccessopenaccessgreen
kops.flag.knbibliographytrue
kops.identifier.nbnurn:nbn:de:bsz:352-209040deu
kops.sourcefieldANISIMOVA, Maria, ed.. <i>Evolutionary Genomics</i>. Totowa, NJ: Humana Press, 2012, pp. 385-395. Methods in Molecular Biology. 855. ISBN 978-1-61779-581-7. Available under: doi: 10.1007/978-1-61779-582-4_14deu
kops.sourcefield.plainANISIMOVA, Maria, ed.. Evolutionary Genomics. Totowa, NJ: Humana Press, 2012, pp. 385-395. Methods in Molecular Biology. 855. ISBN 978-1-61779-581-7. Available under: doi: 10.1007/978-1-61779-582-4_14deu
kops.sourcefield.plainANISIMOVA, Maria, ed.. Evolutionary Genomics. Totowa, NJ: Humana Press, 2012, pp. 385-395. Methods in Molecular Biology. 855. ISBN 978-1-61779-581-7. Available under: doi: 10.1007/978-1-61779-582-4_14eng
kops.submitter.emaillaura.liebermann@uni-konstanz.dedeu
relation.isAuthorOfPublication11ee28a4-06fc-4447-a5fb-95a044b3895a
relation.isAuthorOfPublication77c33793-52cc-44a7-9936-fec7d6e8d15c
relation.isAuthorOfPublication.latestForDiscovery11ee28a4-06fc-4447-a5fb-95a044b3895a
source.bibliographicInfo.fromPage385
source.bibliographicInfo.seriesNumber855
source.bibliographicInfo.toPage395
source.contributor.editorAnisimova, Maria
source.identifier.isbn978-1-61779-581-7
source.publisherHumana Press
source.publisher.locationTotowa, NJ
source.relation.ispartofseriesMethods in Molecular Biology
source.titleEvolutionary Genomics

Dateien

Originalbündel

Gerade angezeigt 1 - 1 von 1
Vorschaubild nicht verfügbar
Name:
Meyer_209040.pdf
Größe:
4.67 MB
Format:
Adobe Portable Document Format
Meyer_209040.pdf
Meyer_209040.pdfGröße: 4.67 MBDownloads: 987

Lizenzbündel

Gerade angezeigt 1 - 1 von 1
Vorschaubild nicht verfügbar
Name:
license.txt
Größe:
1.92 KB
Format:
Plain Text
Beschreibung:
license.txt
license.txtGröße: 1.92 KBDownloads: 0