Permanent draft genome sequence of Comamonas testosteroni KF-1

Lade...
Vorschaubild
Dateien
Weiss_252973.pdf
Weiss_252973.pdfGröße: 1.39 MBDownloads: 1070
Datum
2013
Autor:innen
Kesberg, Anna-Isabella
LaButti, Kurt M.
Pitluck, Sam
Bruce, David
Hauser, Loren
Copeland, Alex
Woyke, Tanja
Lowry, Stephen
Lucas, Susan
Herausgeber:innen
Kontakt
ISSN der Zeitschrift
Electronic ISSN
ISBN
Bibliografische Daten
Verlag
Schriftenreihe
Auflagebezeichnung
ArXiv-ID
Internationale Patentnummer
EU-Projektnummer
DFG-Projektnummer
Projekt
Open Access-Veröffentlichung
Sammlungen
Gesperrt bis
Titel in einer weiteren Sprache
Forschungsvorhaben
Organisationseinheiten
Zeitschriftenheft
Publikationstyp
Zeitschriftenartikel
Publikationsstatus
unikn.publication.listelement.citation.prefix.version.undefined
Standards in Genomic Sciences. 2013, 8(2), pp. 239-254. eISSN 1944-3277. Available under: doi: 10.4056/sigs.3847890
Zusammenfassung

Comamonas testosteroni KF-1 is a model organism for the elucidation of the novel biochemical degradation pathways for xenobiotic 4-sulfophenylcarboxylates (SPC) formed during biodegradation of synthetic 4‑sulfophenylalkane surfactants (linear alkylbenzenesulfonates, LAS) by bacterial communities. Here we describe the features of this organism, together with the complete genome sequence and annotation. The 6,026,527 bp long chromosome (one sequencing gap) exhibits an average G+C content of 61.79% and is predicted to encode 5,492 protein-coding genes and 114 RNA genes.

Zusammenfassung in einer weiteren Sprache
Fachgebiet (DDC)
570 Biowissenschaften, Biologie
Schlagwörter
Comamonas testosteroni KF-1, aerobic, Gram-negative, Comamonadaceae, xenobiotic surfactant biodegradation
Konferenz
Rezension
undefined / . - undefined, undefined
Zitieren
ISO 690WEISS, Michael, Anna-Isabella KESBERG, Kurt M. LABUTTI, Sam PITLUCK, David BRUCE, Loren HAUSER, Alex COPELAND, Tanja WOYKE, Stephen LOWRY, Susan LUCAS, Miriam LAND, Lynne GOODWIN, Staffan KJELLEBERG, Alasdair M. COOK, Matthias T. BUHMANN, Torsten THOMAS, David SCHLEHECK, 2013. Permanent draft genome sequence of Comamonas testosteroni KF-1. In: Standards in Genomic Sciences. 2013, 8(2), pp. 239-254. eISSN 1944-3277. Available under: doi: 10.4056/sigs.3847890
BibTex
@article{Weiss2013Perma-25297,
  year={2013},
  doi={10.4056/sigs.3847890},
  title={Permanent draft genome sequence of Comamonas testosteroni KF-1},
  number={2},
  volume={8},
  journal={Standards in Genomic Sciences},
  pages={239--254},
  author={Weiss, Michael and Kesberg, Anna-Isabella and LaButti, Kurt M. and Pitluck, Sam and Bruce, David and Hauser, Loren and Copeland, Alex and Woyke, Tanja and Lowry, Stephen and Lucas, Susan and Land, Miriam and Goodwin, Lynne and Kjelleberg, Staffan and Cook, Alasdair M. and Buhmann, Matthias T. and Thomas, Torsten and Schleheck, David}
}
RDF
<rdf:RDF
    xmlns:dcterms="http://purl.org/dc/terms/"
    xmlns:dc="http://purl.org/dc/elements/1.1/"
    xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#"
    xmlns:bibo="http://purl.org/ontology/bibo/"
    xmlns:dspace="http://digital-repositories.org/ontologies/dspace/0.1.0#"
    xmlns:foaf="http://xmlns.com/foaf/0.1/"
    xmlns:void="http://rdfs.org/ns/void#"
    xmlns:xsd="http://www.w3.org/2001/XMLSchema#" > 
  <rdf:Description rdf:about="https://kops.uni-konstanz.de/server/rdf/resource/123456789/25297">
    <dc:contributor>Kjelleberg, Staffan</dc:contributor>
    <dc:creator>Pitluck, Sam</dc:creator>
    <dc:language>eng</dc:language>
    <dcterms:title>Permanent draft genome sequence of Comamonas testosteroni KF-1</dcterms:title>
    <dc:contributor>Weiss, Michael</dc:contributor>
    <dc:creator>Schleheck, David</dc:creator>
    <dc:creator>Copeland, Alex</dc:creator>
    <dc:date rdf:datatype="http://www.w3.org/2001/XMLSchema#dateTime">2013-12-04T04:03:35Z</dc:date>
    <dc:creator>Land, Miriam</dc:creator>
    <dspace:hasBitstream rdf:resource="https://kops.uni-konstanz.de/bitstream/123456789/25297/2/Weiss_252973.pdf"/>
    <dc:contributor>LaButti, Kurt M.</dc:contributor>
    <dspace:isPartOfCollection rdf:resource="https://kops.uni-konstanz.de/server/rdf/resource/123456789/28"/>
    <dcterms:isPartOf rdf:resource="https://kops.uni-konstanz.de/server/rdf/resource/123456789/28"/>
    <dc:creator>Hauser, Loren</dc:creator>
    <dc:contributor>Kesberg, Anna-Isabella</dc:contributor>
    <dcterms:abstract xml:lang="eng">Comamonas testosteroni KF-1 is a model organism for the elucidation of the novel biochemical degradation pathways for xenobiotic 4-sulfophenylcarboxylates (SPC) formed during biodegradation of synthetic 4‑sulfophenylalkane surfactants (linear alkylbenzenesulfonates, LAS) by bacterial communities. Here we describe the features of this organism, together with the complete genome sequence and annotation. The 6,026,527 bp long chromosome (one sequencing gap) exhibits an average G+C content of 61.79% and is predicted to encode 5,492 protein-coding genes and 114 RNA genes.</dcterms:abstract>
    <dc:contributor>Land, Miriam</dc:contributor>
    <dc:creator>LaButti, Kurt M.</dc:creator>
    <dc:rights>Attribution 2.5 Generic</dc:rights>
    <dc:creator>Goodwin, Lynne</dc:creator>
    <dcterms:issued>2013</dcterms:issued>
    <dc:creator>Buhmann, Matthias T.</dc:creator>
    <dc:creator>Thomas, Torsten</dc:creator>
    <dc:creator>Bruce, David</dc:creator>
    <dc:creator>Lucas, Susan</dc:creator>
    <dcterms:available rdf:datatype="http://www.w3.org/2001/XMLSchema#dateTime">2013-12-04T04:03:35Z</dcterms:available>
    <dc:contributor>Cook, Alasdair M.</dc:contributor>
    <dc:contributor>Thomas, Torsten</dc:contributor>
    <dcterms:rights rdf:resource="http://creativecommons.org/licenses/by/2.5/"/>
    <dc:contributor>Lucas, Susan</dc:contributor>
    <dc:contributor>Pitluck, Sam</dc:contributor>
    <dc:contributor>Hauser, Loren</dc:contributor>
    <dc:creator>Cook, Alasdair M.</dc:creator>
    <dc:contributor>Woyke, Tanja</dc:contributor>
    <dc:creator>Woyke, Tanja</dc:creator>
    <dc:contributor>Bruce, David</dc:contributor>
    <void:sparqlEndpoint rdf:resource="http://localhost/fuseki/dspace/sparql"/>
    <bibo:uri rdf:resource="http://kops.uni-konstanz.de/handle/123456789/25297"/>
    <dc:contributor>Schleheck, David</dc:contributor>
    <dc:contributor>Lowry, Stephen</dc:contributor>
    <dc:creator>Kjelleberg, Staffan</dc:creator>
    <dc:contributor>Copeland, Alex</dc:contributor>
    <foaf:homepage rdf:resource="http://localhost:8080/"/>
    <dcterms:hasPart rdf:resource="https://kops.uni-konstanz.de/bitstream/123456789/25297/2/Weiss_252973.pdf"/>
    <dcterms:bibliographicCitation>Standards in Genomic Sciences ; 8 (2013), 2. - S. 239-254</dcterms:bibliographicCitation>
    <dc:creator>Lowry, Stephen</dc:creator>
    <dc:creator>Weiss, Michael</dc:creator>
    <dc:contributor>Goodwin, Lynne</dc:contributor>
    <dc:contributor>Buhmann, Matthias T.</dc:contributor>
    <dc:creator>Kesberg, Anna-Isabella</dc:creator>
  </rdf:Description>
</rdf:RDF>
Interner Vermerk
xmlui.Submission.submit.DescribeStep.inputForms.label.kops_note_fromSubmitter
Kontakt
URL der Originalveröffentl.
Prüfdatum der URL
Prüfungsdatum der Dissertation
Finanzierungsart
Kommentar zur Publikation
Allianzlizenz
Corresponding Authors der Uni Konstanz vorhanden
Internationale Co-Autor:innen
Universitätsbibliographie
Ja
Begutachtet