Publikation:

Permanent draft genome sequence of Comamonas testosteroni KF-1

Vorschaubild

Dateien

Weiss_252973.pdf
Weiss_252973.pdfGröße: 1.39 MBDownloads: 1125

Datum

2013

Autor:innen

Kesberg, Anna-Isabella
LaButti, Kurt M.
Pitluck, Sam
Bruce, David
Hauser, Loren
Copeland, Alex
Woyke, Tanja
Lowry, Stephen
Lucas, Susan
7 mehr anzeigen

Herausgeber:innen

Kontakt

ISSN der Zeitschrift

Electronic ISSN

ISBN

Bibliografische Daten

Verlag

Schriftenreihe

Auflagebezeichnung

URI (zitierfähiger Link)
http://nbn-resolving.de/urn:nbn:de:bsz:352-252973
DOI (zitierfähiger Link)
https://doi.org/10.4056/sigs.3847890
ArXiv-ID

Internationale Patentnummer

Link zur Lizenz
Attribution 2.5 Generic

Angaben zur Forschungsförderung

Projekt

Open Access-Veröffentlichung
Open Access Gold

Sammlungen

Biologie: Publikationen
Core Facility der Universität Konstanz

Gesperrt bis

Titel in einer weiteren Sprache

Publikationstyp
Zeitschriftenartikel
Publikationsstatus
Published

Erschienen in

Standards in Genomic Sciences. 2013, 8(2), pp. 239-254. eISSN 1944-3277. Available under: doi: 10.4056/sigs.3847890

Zusammenfassung

Comamonas testosteroni KF-1 is a model organism for the elucidation of the novel biochemical degradation pathways for xenobiotic 4-sulfophenylcarboxylates (SPC) formed during biodegradation of synthetic 4‑sulfophenylalkane surfactants (linear alkylbenzenesulfonates, LAS) by bacterial communities. Here we describe the features of this organism, together with the complete genome sequence and annotation. The 6,026,527 bp long chromosome (one sequencing gap) exhibits an average G+C content of 61.79% and is predicted to encode 5,492 protein-coding genes and 114 RNA genes.

Zusammenfassung in einer weiteren Sprache

Fachgebiet (DDC)
570 Biowissenschaften, Biologie

Schlagwörter

Comamonas testosteroni KF-1, aerobic, Gram-negative, Comamonadaceae, xenobiotic surfactant biodegradation

Konferenz

Rezension
undefined / . - undefined, undefined

Forschungsvorhaben

Organisationseinheiten

Zeitschriftenheft

Zugehörige Datensätze in KOPS

Zitieren

ISO 690WEISS, Michael, Anna-Isabella KESBERG, Kurt M. LABUTTI, Sam PITLUCK, David BRUCE, Loren HAUSER, Alex COPELAND, Tanja WOYKE, Stephen LOWRY, Susan LUCAS, Miriam LAND, Lynne GOODWIN, Staffan KJELLEBERG, Alasdair M. COOK, Matthias T. BUHMANN, Torsten THOMAS, David SCHLEHECK, 2013. Permanent draft genome sequence of Comamonas testosteroni KF-1. In: Standards in Genomic Sciences. 2013, 8(2), pp. 239-254. eISSN 1944-3277. Available under: doi: 10.4056/sigs.3847890
BibTex
@article{Weiss2013Perma-25297,
  year={2013},
  doi={10.4056/sigs.3847890},
  title={Permanent draft genome sequence of Comamonas testosteroni KF-1},
  number={2},
  volume={8},
  journal={Standards in Genomic Sciences},
  pages={239--254},
  author={Weiss, Michael and Kesberg, Anna-Isabella and LaButti, Kurt M. and Pitluck, Sam and Bruce, David and Hauser, Loren and Copeland, Alex and Woyke, Tanja and Lowry, Stephen and Lucas, Susan and Land, Miriam and Goodwin, Lynne and Kjelleberg, Staffan and Cook, Alasdair M. and Buhmann, Matthias T. and Thomas, Torsten and Schleheck, David}
}
RDF
<rdf:RDF
    xmlns:dcterms="http://purl.org/dc/terms/"
    xmlns:dc="http://purl.org/dc/elements/1.1/"
    xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#"
    xmlns:bibo="http://purl.org/ontology/bibo/"
    xmlns:dspace="http://digital-repositories.org/ontologies/dspace/0.1.0#"
    xmlns:foaf="http://xmlns.com/foaf/0.1/"
    xmlns:void="http://rdfs.org/ns/void#"
    xmlns:xsd="http://www.w3.org/2001/XMLSchema#" > 
  <rdf:Description rdf:about="https://kops.uni-konstanz.de/server/rdf/resource/123456789/25297">
    <dc:contributor>Kjelleberg, Staffan</dc:contributor>
    <dc:creator>Pitluck, Sam</dc:creator>
    <dc:language>eng</dc:language>
    <dcterms:title>Permanent draft genome sequence of Comamonas testosteroni KF-1</dcterms:title>
    <dc:contributor>Weiss, Michael</dc:contributor>
    <dc:creator>Schleheck, David</dc:creator>
    <dc:creator>Copeland, Alex</dc:creator>
    <dc:date rdf:datatype="http://www.w3.org/2001/XMLSchema#dateTime">2013-12-04T04:03:35Z</dc:date>
    <dc:creator>Land, Miriam</dc:creator>
    <dspace:hasBitstream rdf:resource="https://kops.uni-konstanz.de/bitstream/123456789/25297/2/Weiss_252973.pdf"/>
    <dc:contributor>LaButti, Kurt M.</dc:contributor>
    <dspace:isPartOfCollection rdf:resource="https://kops.uni-konstanz.de/server/rdf/resource/123456789/28"/>
    <dcterms:isPartOf rdf:resource="https://kops.uni-konstanz.de/server/rdf/resource/123456789/28"/>
    <dc:creator>Hauser, Loren</dc:creator>
    <dc:contributor>Kesberg, Anna-Isabella</dc:contributor>
    <dcterms:abstract xml:lang="eng">Comamonas testosteroni KF-1 is a model organism for the elucidation of the novel biochemical degradation pathways for xenobiotic 4-sulfophenylcarboxylates (SPC) formed during biodegradation of synthetic 4‑sulfophenylalkane surfactants (linear alkylbenzenesulfonates, LAS) by bacterial communities. Here we describe the features of this organism, together with the complete genome sequence and annotation. The 6,026,527 bp long chromosome (one sequencing gap) exhibits an average G+C content of 61.79% and is predicted to encode 5,492 protein-coding genes and 114 RNA genes.</dcterms:abstract>
    <dc:contributor>Land, Miriam</dc:contributor>
    <dc:creator>LaButti, Kurt M.</dc:creator>
    <dc:rights>Attribution 2.5 Generic</dc:rights>
    <dc:creator>Goodwin, Lynne</dc:creator>
    <dcterms:issued>2013</dcterms:issued>
    <dc:creator>Buhmann, Matthias T.</dc:creator>
    <dc:creator>Thomas, Torsten</dc:creator>
    <dc:creator>Bruce, David</dc:creator>
    <dc:creator>Lucas, Susan</dc:creator>
    <dcterms:available rdf:datatype="http://www.w3.org/2001/XMLSchema#dateTime">2013-12-04T04:03:35Z</dcterms:available>
    <dc:contributor>Cook, Alasdair M.</dc:contributor>
    <dc:contributor>Thomas, Torsten</dc:contributor>
    <dcterms:rights rdf:resource="http://creativecommons.org/licenses/by/2.5/"/>
    <dc:contributor>Lucas, Susan</dc:contributor>
    <dc:contributor>Pitluck, Sam</dc:contributor>
    <dc:contributor>Hauser, Loren</dc:contributor>
    <dc:creator>Cook, Alasdair M.</dc:creator>
    <dc:contributor>Woyke, Tanja</dc:contributor>
    <dc:creator>Woyke, Tanja</dc:creator>
    <dc:contributor>Bruce, David</dc:contributor>
    <void:sparqlEndpoint rdf:resource="http://localhost/fuseki/dspace/sparql"/>
    <bibo:uri rdf:resource="http://kops.uni-konstanz.de/handle/123456789/25297"/>
    <dc:contributor>Schleheck, David</dc:contributor>
    <dc:contributor>Lowry, Stephen</dc:contributor>
    <dc:creator>Kjelleberg, Staffan</dc:creator>
    <dc:contributor>Copeland, Alex</dc:contributor>
    <foaf:homepage rdf:resource="http://localhost:8080/"/>
    <dcterms:hasPart rdf:resource="https://kops.uni-konstanz.de/bitstream/123456789/25297/2/Weiss_252973.pdf"/>
    <dcterms:bibliographicCitation>Standards in Genomic Sciences ; 8 (2013), 2. - S. 239-254</dcterms:bibliographicCitation>
    <dc:creator>Lowry, Stephen</dc:creator>
    <dc:creator>Weiss, Michael</dc:creator>
    <dc:contributor>Goodwin, Lynne</dc:contributor>
    <dc:contributor>Buhmann, Matthias T.</dc:contributor>
    <dc:creator>Kesberg, Anna-Isabella</dc:creator>
  </rdf:Description>
</rdf:RDF>

Interner Vermerk

xmlui.Submission.submit.DescribeStep.inputForms.label.kops_note_fromSubmitter

Kontakt
URL der Originalveröffentl.

Prüfdatum der URL

Prüfungsdatum der Dissertation

Finanzierungsart

Kommentar zur Publikation

Allianzlizenz
Corresponding Authors der Uni Konstanz vorhanden
Internationale Co-Autor:innen
Universitätsbibliographie
Ja
Begutachtet
Diese Publikation teilen