Visual Analysis of Overlapping Biological Networks

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2009
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Fung, David C. Y.
Hong, Seok-Hee
Koschützki, Dirk
Xu, Kai
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BANISSI, Ebad, ed. and others. 2009 13th International Conference Information Visualisation : IV 2009 ; Barcelona, Spain, 15 - 17 July 2009. Piscataway, NJ: IEEE, 2009, pp. 337-342. ISSN 1550-6037. eISSN 2375-0138. ISBN 978-0-7695-3733-7. Available under: doi: 10.1109/IV.2009.55
Zusammenfassung

This paper investigates a new problem of visualizing a set of overlapping networks. We present two methods for constructing visualization of two and three overlapping networks in three dimensions. Our methods aim to achieve both drawing aesthetics (or conventions) for each individual network and exposing the common nodes between the overlapping networks. We evaluated our approaches using biological networks including protein interaction network, metabolic network, and gene regulatory network, from the bacterium Escherichia coli and crop plants to demonstrate their usefulness to support biological analysis.

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004 Informatik
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Computergrafik; Visualisierung; Bildverarbeitung; Kongress
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13th International Conference Information Visualisation, IV, 15. Juli 2009 - 17. Juli 2009, Barcelona, Spain
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Zitieren
ISO 690FUNG, David C. Y., Seok-Hee HONG, Dirk KOSCHÜTZKI, Falk SCHREIBER, Kai XU, 2009. Visual Analysis of Overlapping Biological Networks. 13th International Conference Information Visualisation, IV. Barcelona, Spain, 15. Juli 2009 - 17. Juli 2009. In: BANISSI, Ebad, ed. and others. 2009 13th International Conference Information Visualisation : IV 2009 ; Barcelona, Spain, 15 - 17 July 2009. Piscataway, NJ: IEEE, 2009, pp. 337-342. ISSN 1550-6037. eISSN 2375-0138. ISBN 978-0-7695-3733-7. Available under: doi: 10.1109/IV.2009.55
BibTex
@inproceedings{Fung2009-07Visua-40351,
  year={2009},
  doi={10.1109/IV.2009.55},
  title={Visual Analysis of Overlapping Biological Networks},
  isbn={978-0-7695-3733-7},
  issn={1550-6037},
  publisher={IEEE},
  address={Piscataway, NJ},
  booktitle={2009 13th International Conference Information Visualisation : IV 2009 ; Barcelona, Spain, 15 - 17 July 2009},
  pages={337--342},
  editor={Banissi, Ebad},
  author={Fung, David C. Y. and Hong, Seok-Hee and Koschützki, Dirk and Schreiber, Falk and Xu, Kai}
}
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