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Coordinated perspectives and enhanced force-directed layout for the analysis of network motifs

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2006

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Klukas, Christian
Schwöbbermeyer, Henning

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MISUE, Kazuo, ed. and others. Information Visualisation 2006 : proceedings of the Asia Pacific Symposium on Information Visualisation (APVIS2006). Australia: Australian Computer Society, 2006, pp. 39-48. Conferences in research and practice in information technology / Australian Computer Society. 60. ISSN 1445-1336. ISBN 1-920682-41-4

Zusammenfassung

The analysis of network motifs, patterns of local interconnections with potential functional properties, has applications in many fields of science. Network motif analysis is particularly important for the exploration of biological networks. The distribution and multiple occurrences of motifs in a network, complicated by different concepts for the determination of motif frequency, create various difficulties in understanding and interpretation. We present a system that facilitates the analysis of network motifs by presenting coordinated perspectives simultaneously. A list of motifs supported by the network, visual representations of motifs of interest, a motif fingerprint and a visualisation of motif matches in the network are interwoven in a single interface. A motif and cluster-preserving force-directed layout algorithm supports the visual analysis of network motifs. This coordination of perspectives significantly enhances the explorative power of network motif analysis.

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network analysis, network motifs, coordinated perspectives, multiple views, information visualisation, graph drawing, force-directed layout

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APVis '06 Proceedings of the 2006 Asia-Pacific Symposium on Information Visualisation, 1. Feb. 2006 - 3. Feb. 2006, Tokyo
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ISO 690KLUKAS, Christian, Falk SCHREIBER, Henning SCHWÖBBERMEYER, 2006. Coordinated perspectives and enhanced force-directed layout for the analysis of network motifs. APVis '06 Proceedings of the 2006 Asia-Pacific Symposium on Information Visualisation. Tokyo, 1. Feb. 2006 - 3. Feb. 2006. In: MISUE, Kazuo, ed. and others. Information Visualisation 2006 : proceedings of the Asia Pacific Symposium on Information Visualisation (APVIS2006). Australia: Australian Computer Society, 2006, pp. 39-48. Conferences in research and practice in information technology / Australian Computer Society. 60. ISSN 1445-1336. ISBN 1-920682-41-4
BibTex
@inproceedings{Klukas2006Coord-40292,
  year={2006},
  title={Coordinated perspectives and enhanced force-directed layout for the analysis of network motifs},
  url={https://dl.acm.org/citation.cfm?id=1151910},
  number={60},
  isbn={1-920682-41-4},
  issn={1445-1336},
  publisher={Australian Computer Society},
  address={Australia},
  series={Conferences in research and practice in information technology / Australian Computer Society},
  booktitle={Information Visualisation 2006 : proceedings of the Asia Pacific Symposium on Information Visualisation (APVIS2006)},
  pages={39--48},
  editor={Misue, Kazuo},
  author={Klukas, Christian and Schreiber, Falk and Schwöbbermeyer, Henning}
}
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