Structural basis for the activity and substrate specificity of fluoroacetyl-CoA thioesterase FlK
Structural basis for the activity and substrate specificity of fluoroacetyl-CoA thioesterase FlK
No Thumbnail Available
Files
There are no files associated with this item.
Date
2010
Authors
Dias, Marcio V. B.
Huang, Fanglu
Chirgadze, Dimitri Y.
Tosin, Manuela
Dry, Emily F. V.
Leadlay, Peter F.
Spencer, Jonathan B.
Blundell, Tom L.
Editors
Journal ISSN
Electronic ISSN
ISBN
Bibliographical data
Publisher
Series
URI (citable link)
DOI (citable link)
International patent number
Link to the license
EU project number
Project
Open Access publication
Collections
Title in another language
Publication type
Journal article
Publication status
Published in
Journal of Biological Chemistry ; 285 (2010), 29. - pp. 22495-22504. - ISSN 0021-9258. - eISSN 1083-351X
Abstract
The thioesterase FlK from the fluoroacetate-producing Streptomyces cattleya catalyzes the hydrolysis of fluoroacetyl-coenzyme A. This provides an effective self-defense mechanism, preventing any fluoroacetyl-coenzyme A formed from being further metabolized to 4-hydroxy-trans-aconitate, a lethal inhibitor of the tricarboxylic acid cycle. Remarkably, FlK does not accept acetyl-coenzyme A as a substrate. Crystal structure analysis shows that FlK forms a dimer, in which each subunit adopts a hot dog fold as observed for type II thioesterases. Unlike other type II thioesterases, which invariably utilize either an aspartate or a glutamate as catalytic base, we show by site-directed mutagenesis and crystallography that FlK employs a catalytic triad composed of Thr42, His76, and a water molecule, analogous to the Ser/Cys-His-acid triad of type I thioesterases. Structural comparison of FlK complexed with various substrate analogues suggests that the interaction between the fluorine of the substrate and the side chain of Arg120 located opposite to the catalytic triad is essential for correct coordination of the substrate at the active site and therefore accounts for the substrate specificity.
Summary in another language
Subject (DDC)
570 Biosciences, Biology
Keywords
Acetyl-Coenzyme A,Bacterial Metabolism,Coenzyme A,Crystal Structure,Enzyme Mechanisms,Protein Structure,Site-directed Mutagenesis,Fluoroacetyl-Coenzyme A,Thioesterase
Conference
Review
undefined / . - undefined, undefined. - (undefined; undefined)
Cite This
ISO 690
DIAS, Marcio V. B., Fanglu HUANG, Dimitri Y. CHIRGADZE, Manuela TOSIN, Dieter SPITELLER, Emily F. V. DRY, Peter F. LEADLAY, Jonathan B. SPENCER, Tom L. BLUNDELL, 2010. Structural basis for the activity and substrate specificity of fluoroacetyl-CoA thioesterase FlK. In: Journal of Biological Chemistry. 285(29), pp. 22495-22504. ISSN 0021-9258. eISSN 1083-351X. Available under: doi: 10.1074/jbc.M110.107177BibTex
@article{Dias2010-07-16Struc-15288, year={2010}, doi={10.1074/jbc.M110.107177}, title={Structural basis for the activity and substrate specificity of fluoroacetyl-CoA thioesterase FlK}, number={29}, volume={285}, issn={0021-9258}, journal={Journal of Biological Chemistry}, pages={22495--22504}, author={Dias, Marcio V. B. and Huang, Fanglu and Chirgadze, Dimitri Y. and Tosin, Manuela and Spiteller, Dieter and Dry, Emily F. V. and Leadlay, Peter F. and Spencer, Jonathan B. and Blundell, Tom L.} }
RDF
<rdf:RDF xmlns:dcterms="http://purl.org/dc/terms/" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bibo="http://purl.org/ontology/bibo/" xmlns:dspace="http://digital-repositories.org/ontologies/dspace/0.1.0#" xmlns:foaf="http://xmlns.com/foaf/0.1/" xmlns:void="http://rdfs.org/ns/void#" xmlns:xsd="http://www.w3.org/2001/XMLSchema#" > <rdf:Description rdf:about="https://kops.uni-konstanz.de/server/rdf/resource/123456789/15288"> <dc:creator>Leadlay, Peter F.</dc:creator> <dspace:isPartOfCollection rdf:resource="https://kops.uni-konstanz.de/server/rdf/resource/123456789/28"/> <dc:contributor>Spiteller, Dieter</dc:contributor> <void:sparqlEndpoint rdf:resource="http://localhost/fuseki/dspace/sparql"/> <dcterms:title>Structural basis for the activity and substrate specificity of fluoroacetyl-CoA thioesterase FlK</dcterms:title> <dc:creator>Spencer, Jonathan B.</dc:creator> <dc:contributor>Tosin, Manuela</dc:contributor> <dcterms:available rdf:datatype="http://www.w3.org/2001/XMLSchema#dateTime">2011-10-19T07:27:55Z</dcterms:available> <dc:creator>Huang, Fanglu</dc:creator> <dc:creator>Dry, Emily F. V.</dc:creator> <dcterms:bibliographicCitation>Publ. in: The Journal of Biological Chemistry ; 285 (2010), 29. - pp. 22495-22504</dcterms:bibliographicCitation> <dc:creator>Blundell, Tom L.</dc:creator> <dc:date rdf:datatype="http://www.w3.org/2001/XMLSchema#dateTime">2011-10-19T07:27:55Z</dc:date> <dc:contributor>Blundell, Tom L.</dc:contributor> <foaf:homepage rdf:resource="http://localhost:8080/"/> <dc:contributor>Dry, Emily F. V.</dc:contributor> <dc:rights>terms-of-use</dc:rights> <dcterms:abstract xml:lang="eng">The thioesterase FlK from the fluoroacetate-producing Streptomyces cattleya catalyzes the hydrolysis of fluoroacetyl-coenzyme A. This provides an effective self-defense mechanism, preventing any fluoroacetyl-coenzyme A formed from being further metabolized to 4-hydroxy-trans-aconitate, a lethal inhibitor of the tricarboxylic acid cycle. Remarkably, FlK does not accept acetyl-coenzyme A as a substrate. Crystal structure analysis shows that FlK forms a dimer, in which each subunit adopts a hot dog fold as observed for type II thioesterases. Unlike other type II thioesterases, which invariably utilize either an aspartate or a glutamate as catalytic base, we show by site-directed mutagenesis and crystallography that FlK employs a catalytic triad composed of Thr42, His76, and a water molecule, analogous to the Ser/Cys-His-acid triad of type I thioesterases. Structural comparison of FlK complexed with various substrate analogues suggests that the interaction between the fluorine of the substrate and the side chain of Arg120 located opposite to the catalytic triad is essential for correct coordination of the substrate at the active site and therefore accounts for the substrate specificity.</dcterms:abstract> <dc:contributor>Huang, Fanglu</dc:contributor> <dcterms:rights rdf:resource="https://rightsstatements.org/page/InC/1.0/"/> <dcterms:issued>2010-07-16</dcterms:issued> <dc:contributor>Chirgadze, Dimitri Y.</dc:contributor> <dc:contributor>Spencer, Jonathan B.</dc:contributor> <dc:contributor>Dias, Marcio V. B.</dc:contributor> <bibo:uri rdf:resource="http://kops.uni-konstanz.de/handle/123456789/15288"/> <dc:language>eng</dc:language> <dc:creator>Tosin, Manuela</dc:creator> <dcterms:isPartOf rdf:resource="https://kops.uni-konstanz.de/server/rdf/resource/123456789/28"/> <dc:creator>Spiteller, Dieter</dc:creator> <dc:creator>Chirgadze, Dimitri Y.</dc:creator> <dc:contributor>Leadlay, Peter F.</dc:contributor> <dc:creator>Dias, Marcio V. B.</dc:creator> </rdf:Description> </rdf:RDF>
Internal note
xmlui.Submission.submit.DescribeStep.inputForms.label.kops_note_fromSubmitter
Examination date of dissertation
Method of financing
Comment on publication
Alliance license
Corresponding Authors der Uni Konstanz vorhanden
International Co-Authors
Bibliography of Konstanz
No