Visualizing Related Metabolic Pathways in Two and a Half Dimensions

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LIOTTA, Giuseppe, ed.. Graph Drawing. Berlin, Heidelberg: Springer Berlin Heidelberg, 2004, pp. 111-122. Lecture Notes in Computer Science. 2912. ISBN 978-3-540-20831-0. Available under: doi: 10.1007/978-3-540-24595-7_10
Zusammenfassung

We propose a method for visualizing a set of related metabolic pathways using 2 1/2D graph drawing. Interdependent, twodimensional layouts of each pathway are stacked on top of each other so that biologists get a full picture of subtle and significant differences among the pathways. Layouts are determined by a global layout of the union of all pathway-representing graphs using a variant of the proven Sugiyama approach for layered graph drawing that allows edges to cross if they appear in different graphs.

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ISO 690BRANDES, Ulrik, Tim DWYER, Falk SCHREIBER, 2004. Visualizing Related Metabolic Pathways in Two and a Half Dimensions. In: LIOTTA, Giuseppe, ed.. Graph Drawing. Berlin, Heidelberg: Springer Berlin Heidelberg, 2004, pp. 111-122. Lecture Notes in Computer Science. 2912. ISBN 978-3-540-20831-0. Available under: doi: 10.1007/978-3-540-24595-7_10
BibTex
@inproceedings{Brandes2004Visua-5852,
  year={2004},
  doi={10.1007/978-3-540-24595-7_10},
  title={Visualizing Related Metabolic Pathways in Two and a Half Dimensions},
  number={2912},
  isbn={978-3-540-20831-0},
  publisher={Springer Berlin Heidelberg},
  address={Berlin, Heidelberg},
  series={Lecture Notes in Computer Science},
  booktitle={Graph Drawing},
  pages={111--122},
  editor={Liotta, Giuseppe},
  author={Brandes, Ulrik and Dwyer, Tim and Schreiber, Falk}
}
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