Datensatz:

Tara Pacific samples provenance and environmental context - version 2

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Datum der Erstveröffentlichung

2020

Autor:innen

Pesant, Stéphane
Lombard, Fabien
Bourdin, Guillaume
Poulain, Julie
Petit, Emmanuelle
Boss, Emmanuel
Cassar, Nicolas
Cohen, Natalie R.
Dimier, Céline
Douville, Eric

Andere Beitragende

Repositorium der Erstveröffentlichung

Zenodo

Version des Datensatzes

2
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Core Facility der Universität Konstanz
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Titel in einer weiteren Sprache

Publikationsstatus
Published

Zusammenfassung

This publication includes the provenance metadata and environmental context of all samples generated by the Tara Pacific Expedition. The metadata fields and parameters are detailed in the readme files. Provenance is given in a single UTF-8 encoded tab-separated-values file. Environmental context is provided in eleven UTF-8 encoded tab-separated-values files, all with the same structure, but each providing a different statistic:

"n" = number of values
"mean" = mean value
"stdev" = standard deviation
"P05" = 5 percentile, i.e. minimum (Q0)
"P25" = 25 percentile, i.e. first quartile (Q1)
"P50" = 50 percentile, i.e. median (Q2)
"P75" = 75 percentile, i.e. third quartile (Q3)
"P95" = 95 percentile, i.e. maximum (Q4)
"dt" = lag in time, i.e. difference between the collection date/time of the sample and that of the environmental context provided
"dxy" = lag in horizontal space, i.e. distance between the collection location of the sample and that of the environmental context provided
"dz" = lag in vertical space, i.e. difference between the collection depth/altitude of the sample and that of the environmental context provided

Missing value terms are:

"nav" = not-available, i.e. the expected information is not given because it has not been collected or generated
"npr" = not-provided, i.e. the expected information has been collected or generated but it is not given, i.e. a value may be available in a later version or may be obtained by contacting the data providers
"nac" = confidential, i.e. the expected information has been collected or generated but is not available openly because of privacy concerns
"nap" = not-applicable, i.e. no information is expected for this combination of parameter, environment and/or method, e.g. depth below seabed cannot be informed for a sample collected in the water or the atmosphere

Zusammenfassung in einer weiteren Sprache

Fachgebiet (DDC)
570 Biowissenschaften, Biologie

Schlagwörter

Zugehörige Publikationen in KOPS

Publikation
Zeitschriftenartikel
Endogenous viral elements reveal associations between a non-retroviral RNA virus and symbiotic dinoflagellate genomes
(2023) Veglia, Alex J.; Bistolas, Kalia S. I.; Voolstra, Christian R.; Hume, Benjamin C. C.; Ruscheweyh, Hans-Joachim; Planes, Serge; Allemand, Denis; Boissin, Emilie; Wincker, Patrick; Poulain, Julie et al.
Erschienen in: Communications Biology. Springer. 2023, 6, 566. eISSN 2399-3642. Verfügbar unter: doi: 10.1038/s42003-023-04917-9
Link zu zugehöriger Publikation
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Zitieren

ISO 690PESANT, Stéphane, Fabien LOMBARD, Guillaume BOURDIN, Julie POULAIN, Emmanuelle PETIT, Emmanuel BOSS, Nicolas CASSAR, Natalie R. COHEN, Céline DIMIER, Eric DOUVILLE, J. Michel FLORES, Gabriel GORSKY, Benjamin C. C. HUME, Seth G. JOHN, Rachel L. KELLY, Yajuan LIN, Dominique MARIE, Maria-Luiza PEDROTTI, Mireille PUJO PAY, Joséphine RAS, Gilles REVERDIN, Hans-Joachim RUSCHEWEYH, Assaf VARDI, Christian R. VOOLSTRA, Clémentine MOULIN, Emilie BOISSIN, Guillaume IWANKOW, Sarah ROMAC, Sylvain AGOSTINI, Bernard BANAIGS, Chris BOWLER, Colomban DE VARGAS, Didier FORCIOLI, Paola FURLA, Pierre E. GALAND, Eric GILSON, Stéphanie REYNAUD, B. SULLIVAN MATTHEW, Shinichi SUNAGAWA, Olivier THOMAS, Romain TROUBLÉ, Rebecca VEGA THURBER, Patrick WINCKER, Didier ZOCCOLA, Serge PLANES, Denis ALLEMAND, 2020. Tara Pacific samples provenance and environmental context - version 2
BibTex
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    "n" = number of values
    "mean" = mean value
    "stdev" = standard deviation
    "P05" = 5 percentile, i.e. minimum (Q0)
    "P25" = 25 percentile, i.e. first quartile (Q1)
    "P50" = 50 percentile, i.e. median (Q2)
    "P75" = 75 percentile, i.e. third quartile (Q3)
    "P95" = 95 percentile, i.e. maximum (Q4)
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